DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tpr and Ctrb1

DIOPT Version :10

Sequence 1:NP_611611.1 Gene:tpr / 37486 FlyBaseID:FBgn0034661 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_036668.2 Gene:Ctrb1 / 24291 RGDID:2444 Length:263 Species:Rattus norvegicus


Alignment Length:249 Identity:88/249 - (35%)
Similarity:131/249 - (52%) Gaps:17/249 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 CGIANIQ------KRIVGGQETEVHQYPW-VAMLLYGGRFYCAASLLNDQFLLTASHCVYGFRKE 175
            ||:..||      .|||.|::.....:|| |::....|..:|..||:::.:::||:||  |.:..
  Rat    19 CGVPTIQPVLTGLSRIVNGEDAIPGSWPWQVSLQDKTGFHFCGGSLISEDWVVTAAHC--GVKTS 81

  Fly   176 RISVRLLEHDRKMSHMQKIDRKVAEVITHPKYNARNYDNDIAIIKLDEPVEFNEVLHPVCMPTPG 240
            .:.| ..|.|:..........|:|:|..:||:|.....|||.::||..|.:|:|.:..||:|...
  Rat    82 DVVV-AGEFDQGSDEENIQVLKIAQVFKNPKFNMFTVRNDITLLKLATPAQFSETVSAVCLPNVD 145

  Fly   241 RSF-KGENGIVTGWGALKVGG-PTSDTLQEVQVPILSQDECRKSRYGNKITDNMLCGGYDEGGKD 303
            ..| .|.....||||..|... .|.:.||:..:||:|:.:|:|| :|:||||.|:|.|  ..|..
  Rat   146 DDFPPGTVCATTGWGKTKYNALKTPEKLQQAALPIVSEADCKKS-WGSKITDVMICAG--ASGVS 207

  Fly   304 SCQGDSGGPLHIVASGTREHQIAGVVSWGEGCAKAGYPGVYARVNRYGTWIKNL 357
            ||.|||||||.....|.  ..:||:||||.|......|.||:||.....|::.:
  Rat   208 SCMGDSGGPLVCQKDGV--WTLAGIVSWGSGVCSTSTPAVYSRVTALMPWVQQI 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tprNP_611611.1 Tryp_SPc 127..356 CDD:238113 83/231 (36%)
Ctrb1NP_036668.2 Tryp_SPc 34..259 CDD:238113 83/232 (36%)

Return to query results.
Submit another query.