DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Loxl2 and CD5L

DIOPT Version :9

Sequence 1:NP_523806.2 Gene:Loxl2 / 37485 FlyBaseID:FBgn0034660 Length:511 Species:Drosophila melanogaster
Sequence 2:XP_016858295.1 Gene:CD5L / 922 HGNCID:1690 Length:353 Species:Homo sapiens


Alignment Length:251 Identity:81/251 - (32%)
Similarity:102/251 - (40%) Gaps:51/251 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 EGAIRLVGGDNEYEGNIEVLHNGKWGAVCDDEWDSTEADIVCRQLG----FPGMRRYTRSGFFGP 118
            || :||..|....:|.:||.|..:|..||...|....|.:||||||    ....:|..:..:   
Human   136 EG-VRLADGPGHCKGRVEVKHQNQWYTVCQTGWSLRAAKVVCRQLGCGRAVLTQKRCNKHAY--- 196

  Fly   119 ARRRFWMDNLFCEGHEQELVDCHFEGWGENDCEPGEAAGVVCYPPENALIPMATPIIRDEDLPKY 183
            .|:..|:..:.|.|.|..|.||....||:|.|...|...|.|..|.:                  
Human   197 GRKPIWLSQMSCSGREATLQDCPSGPWGKNTCNHDEDTWVECEDPFD------------------ 243

  Fly   184 PIHSRSRLYVRLRGGRSRIEGRVEVSLDGGRWGSVCADGWSLLEANVVCRQLGLGYA-SEAFQTD 247
                     :||.||.:...||:|| |..|.|||||.|.|...|..|||:|||.|.: |.:|:..
Human   244 ---------LRLVGGDNLCSGRLEV-LHKGVWGSVCDDNWGEKEDQVVCKQLGCGKSLSPSFRDR 298

  Fly   248 FFGGFNVSRPVLSGSECYGNETELADCLH-----HDASQGIISCHGNRQHVAAVIC 298
            ...|..|.|..|....|.|.|..|..|.|     ||.:         .|...||||
Human   299 KCYGPGVGRIWLDNVRCSGEEQSLEQCQHRFWGFHDCT---------HQEDVAVIC 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl2NP_523806.2 SR 61..161 CDD:214555 33/103 (32%)
SRCR 66..160 CDD:278931 31/97 (32%)
SR 193..298 CDD:214555 42/110 (38%)
SRCR 198..298 CDD:278931 39/105 (37%)
Lysyl_oxidase 303..503 CDD:279521
CD5LXP_016858295.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165156678
Domainoid 1 1.000 104 1.000 Domainoid score I6689
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.930

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