DRSC/TRiP Functional Genomics Resources

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Protein Alignment Loxl2 and si:ch73-127m5.1

DIOPT Version :10

Sequence 1:NP_523806.2 Gene:Loxl2 / 37485 FlyBaseID:FBgn0034660 Length:511 Species:Drosophila melanogaster
Sequence 2:XP_009305107.1 Gene:si:ch73-127m5.1 / 799158 ZFINID:ZDB-GENE-130531-25 Length:835 Species:Danio rerio


Alignment Length:279 Identity:110/279 - (39%)
Similarity:137/279 - (49%) Gaps:46/279 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 HMADAVVQHRSLEDARQERQRLVHRYTKVLNKEEGAIRLVGGDNEYEGNIEVLHNGKWGAVCDDE 89
            ||.||.|.              .:.||      :|.:|||.|||.:||.:||.|:..||.||||.
Zfish   318 HMEDAGVS--------------CNPYT------DGVVRLVDGDNPWEGRLEVYHSRDWGTVCDDS 362

  Fly    90 WDSTEADIVCRQLGFPGMRRYTRSGFFGPARRRFWMDNLFCEGHEQELVDCHFEGWGENDCEPGE 154
            |....|.:|||||||.|......:|.||.......:|::.|||.|..|::|....||.:||...|
Zfish   363 WTEPHAQVVCRQLGFRGGAEVAPAGAFGEGTGLILLDDVECEGTESSLLECKHGVWGRHDCSHSE 427

  Fly   155 AAGVVCYPPENALIPMATPIIRDEDLPKYPIHSRSRLYVRLRGGRSRIEGRVEVSLDGGRWGSVC 219
            ..|:.|:..||..:|:|.             .|...| |||.||.||.||||||.|: |.|||||
Zfish   428 DVGIRCHRVENNEVPLAP-------------ESTGPL-VRLAGGDSRKEGRVEVFLN-GEWGSVC 477

  Fly   220 ADGWSLLEANVVCRQLGLGYASEAFQTDFFGGFNVSRPVLSGSECYGNETELADCLHHDASQGII 284
            ..||:.:.|.|||||||....|:|....:||. ......||...|.|.|:.|.:|    .|:|..
Zfish   478 DHGWNDVNAAVVCRQLGFNGESKARPMGYFGA-GKGTIHLSNVRCTGKESLLGEC----PSKGQD 537

  Fly   285 S--C-HGNRQHVAAVICDY 300
            |  | ||..   |.|:|||
Zfish   538 SHVCKHGQD---AGVVCDY 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl2NP_523806.2 SR 61..161 CDD:214555 43/99 (43%)
SR 193..298 CDD:214555 49/107 (46%)
Lysyl_oxidase 303..506 CDD:460102
si:ch73-127m5.1XP_009305107.1 KR 49..112 CDD:412161
SR 118..217 CDD:214555
SR 227..327 CDD:214555 5/22 (23%)
SR 334..433 CDD:214555 43/98 (44%)
SR 452..551 CDD:214555 49/107 (46%)
Tryp_SPc 582..826 CDD:238113
Blue background indicates that the domain is not in the aligned region.

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