DRSC/TRiP Functional Genomics Resources

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Protein Alignment Loxl2 and lgals3bp.3

DIOPT Version :10

Sequence 1:NP_523806.2 Gene:Loxl2 / 37485 FlyBaseID:FBgn0034660 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_001035130.1 Gene:lgals3bp.3 / 677742 ZFINID:ZDB-GENE-060331-57 Length:567 Species:Danio rerio


Alignment Length:262 Identity:82/262 - (31%)
Similarity:106/262 - (40%) Gaps:89/262 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 KEEGAIRLVGGDNEYEGNIEVLHNGKWGAVCDDEWDSTEADIVCRQLGFPGMRRYTRSGFFGPAR 120
            |.||.:||||| ....|.:||.|:|:||.||||.||..||.:|||||||||.......|.:|...
Zfish    29 KREGRVRLVGG-LPSSGRVEVYHDGQWGTVCDDGWDLAEAQVVCRQLGFPGAVSVASGGQYGEGS 92

  Fly   121 RRFWMDNLFCEGHEQELVDCHFEGWGENDCEPGEAAGVVCYPPENALIPMATPIIRDEDLPKYPI 185
            ...|:|::.|:|.|..|.:|.|:|||.|||...|.|||||....||                   
Zfish    93 GPIWLDDMNCKGSESILSECCFKGWGVNDCTHQEDAGVVCDTGTNA------------------- 138

  Fly   186 HSRSRLYVRLRGGRSRIEGRVEVSLDGGRWGSVCADGWSLLEANVVCRQLGLGYASEAFQTDFFG 250
                   ..:|          ::|:|...       |.|        ..|||.:.||. ..||  
Zfish   139 -------TNIR----------QISVDNSL-------GLS--------DDLGLLFDSED-GCDF-- 168

  Fly   251 GFNVSRPVLSGSECYGNETELADCLHH--------------------DASQGIISCHGNRQHVAA 295
                    :...:..|.|.||..|:|.                    |.||   :|   :.||:|
Zfish   169 --------IIAVQDLGEEAELTLCVHRVILMMYPELNITNDTRNLTVDVSQ---TC---QSHVSA 219

  Fly   296 VI 297
            :|
Zfish   220 LI 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl2NP_523806.2 SR 61..161 CDD:214555 50/99 (51%)
SR 193..298 CDD:214555 26/125 (21%)
Lysyl_oxidase 303..506 CDD:460102
lgals3bp.3NP_001035130.1 SR 34..132 CDD:214555 49/98 (50%)
BTB_POZ 160..259 CDD:453885 18/79 (23%)
BACK_LGALS3BP 268..341 CDD:350571
Blue background indicates that the domain is not in the aligned region.

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