DRSC/TRiP Functional Genomics Resources

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Protein Alignment Loxl2 and Loxl4

DIOPT Version :9

Sequence 1:NP_523806.2 Gene:Loxl2 / 37485 FlyBaseID:FBgn0034660 Length:511 Species:Drosophila melanogaster
Sequence 2:XP_036017562.1 Gene:Loxl4 / 67573 MGIID:1914823 Length:771 Species:Mus musculus


Alignment Length:461 Identity:186/461 - (40%)
Similarity:256/461 - (55%) Gaps:39/461 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 KEEGAIRLVGGDNEYEGNIEVLHNGKWGAVCDDEWDSTEADIVCRQLGFPGMRRYTRSGFFGPAR 120
            ::|..:||..|....||.:|||.|.:||.|||..|:...|.:|||||||...|........|...
Mouse   321 EQELKVRLRSGAQVGEGRVEVLMNRQWGTVCDHRWNLISASVVCRQLGFGSAREALFGAQLGQGL 385

  Fly   121 RRFWMDNLFCEGHEQELVDC-HFEGWGENDCEPGEAAGVVCYPPENALIPMATPIIRDEDLPKYP 184
            ....:..:.|.|:|:.|.|| ..|| .:|.|:....|.|.|                  ::|...
Mouse   386 GPIHLSEVRCRGYERTLGDCLALEG-SQNGCQHANDAAVRC------------------NIPDMG 431

  Fly   185 IHSRSRLYVRLRGGRSRIEGRVEVSLDGG---RWGSVCADGWSLLEANVVCRQLGLGYASEAFQT 246
            ..::    |||.|||:..||.|||.::..   |||:||:|.|.|.||.|.|||||||:|:.|.:.
Mouse   432 FQNK----VRLAGGRNSEEGVVEVQVEVNGVPRWGTVCSDHWGLTEAMVTCRQLGLGFANFALKD 492

  Fly   247 DFF--GGFNVSRPVLSGSECYGNETELADCLHHDASQGIISC-HGNRQHVAAVICDYIAPDLVVD 308
            .::  |.......|:||..|.|.|..|..|..|    |.:.| ||..:..|.|.|...|||||::
Mouse   493 TWYWQGTPEAKEVVMSGVRCSGTEMALQQCQRH----GPVHCSHGPGRFSAGVACMNSAPDLVMN 553

  Fly   309 YLEIEQTAHLEDRPMLLMQCAMEENCVANEAYQIQRDDPHWRYRSRRLLKFTAAAINAGNADFRP 373
            ...:::||:|||||:.::.||.||||::..|     |...|.|..||||:|::...|.|.|||||
Mouse   554 AQLVQETAYLEDRPLSMLYCAHEENCLSKSA-----DHMDWPYGYRRLLRFSSQIYNLGRADFRP 613

  Fly   374 FKEKSQWEWHMCHMHFHSMEVFATFDIFNLRGIKVAQGHKASFCLEDSNCLPGVAKKYNCANYGD 438
            ...:..|.||.||.|:||:|||..:|:..|.|.|||:||||||||||:||..||.::|.|||:|:
Mouse   614 KAGRHSWIWHQCHRHYHSIEVFTHYDLLTLNGSKVAEGHKASFCLEDTNCPSGVQRRYACANFGE 678

  Fly   439 QGISINCSDVYLYNLDCQWVDVTDLIPGTYVLKIAINPEFKVAEMNYDNNAAICDLIYTANFARV 503
            ||:::.|.|.|.:::||||||:||:.||.|:.::.:||...|||.::.||...|...|......:
Mouse   679 QGVAVGCWDTYRHDIDCQWVDITDVGPGDYIFQVVVNPTNDVAESDFSNNMIRCRCKYDGQRVWL 743

  Fly   504 QNCQLG 509
            .||..|
Mouse   744 HNCHTG 749

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl2NP_523806.2 SR 61..161 CDD:214555 37/100 (37%)
SRCR 66..160 CDD:278931 35/94 (37%)
SR 193..298 CDD:214555 47/110 (43%)
SRCR 198..298 CDD:278931 43/105 (41%)
Lysyl_oxidase 303..503 CDD:279521 94/199 (47%)
Loxl4XP_036017562.1 SR 46..146 CDD:214555
SR 188..300 CDD:214555
SR 326..426 CDD:214555 38/118 (32%)
SR 460..543 CDD:214555 36/86 (42%)
Lysyl_oxidase 549..747 CDD:395944 94/202 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 224 1.000 Domainoid score I2544
eggNOG 1 0.900 - - E1_28KG1
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 373 1.000 Inparanoid score I2084
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D376277at33208
OrthoFinder 1 1.000 - - FOG0000389
OrthoInspector 1 1.000 - - otm43741
orthoMCL 1 0.900 - - OOG6_104333
Panther 1 1.100 - - O PTHR45817
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X896
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.830

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