DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Loxl2 and SCART1

DIOPT Version :10

Sequence 1:NP_523806.2 Gene:Loxl2 / 37485 FlyBaseID:FBgn0034660 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_001382979.1 Gene:SCART1 / 619207 HGNCID:32411 Length:1027 Species:Homo sapiens


Alignment Length:298 Identity:92/298 - (30%)
Similarity:111/298 - (37%) Gaps:104/298 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 LHNGKWGAVCDDEWDSTEADIVCRQLGFPGMRRYTRSGFFGPARRRFWMDNLFCEGHEQELVDCH 141
            ||.|.||.||||.||..:|.:||||||.........:..||....|.|:|.|.|:|||..|..|.
Human   572 LHGGAWGTVCDDAWDLRDAHVVCRQLGCGRALSALGAAHFGAGAGRIWLDELGCQGHESALWQCP 636

  Fly   142 FEGWGENDCEPGEAAGVVCYP-------------------------------------------- 162
            ..|||.:|....|.|||.|..                                            
Human   637 SAGWGRHDWRHKEDAGVFCSESVALRLRGGTCCCAGWLDVFYNGTWGAMCSNALKDLSLSIICKQ 701

  Fly   163 -------------------------------PENALI--------PMATPIIR------DEDLPK 182
                                           |:.|.:        |||..::|      .||.|:
Human   702 LGCGVWGVGLAGEQALPLCGHRDRLGGQHRVPQAAQLHSVAMPFPPMAPALLRPSRAGLSEDRPQ 766

  Fly   183 ---YPIHSRSRL------YVRLRGGRSRIEGRVEVSLDGGRWGSVCADGWSLLEANVVCRQLGLG 238
               .|::..|.|      .:|:|||..|..||||: ...|.||:||.|||.|.:|.|||||||.|
Human   767 AAGEPLNCSSWLGCPEEGALRVRGGEDRCSGRVEL-WHAGSWGTVCDDGWDLADAEVVCRQLGCG 830

  Fly   239 YASEAFQTDFFG-GFNVSRPV-LSGSECYGNETELADC 274
            .|..|.....|| |   |.|| |....|.|:|..|..|
Human   831 RAVAALGAAAFGPG---SGPVWLDEVGCRGSEASLWGC 865

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl2NP_523806.2 SR 61..161 CDD:214555 38/83 (46%)
SR 193..298 CDD:214555 41/84 (49%)
Lysyl_oxidase 303..506 CDD:460102
SCART1NP_001382979.1 SR 28..128 CDD:214555
SR 233..326 CDD:214555
SR 329..428 CDD:214555
SRCR 439..534 CDD:459844
SR <579..656 CDD:214555 33/76 (43%)
SR 661..>705 CDD:214555 0/43 (0%)
SR 786..885 CDD:214555 41/84 (49%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.