DRSC/TRiP Functional Genomics Resources

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Protein Alignment Loxl2 and lgals3bp.1

DIOPT Version :10

Sequence 1:NP_523806.2 Gene:Loxl2 / 37485 FlyBaseID:FBgn0034660 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_998038.1 Gene:lgals3bp.1 / 405809 ZFINID:ZDB-GENE-040426-2262 Length:572 Species:Danio rerio


Alignment Length:281 Identity:82/281 - (29%)
Similarity:117/281 - (41%) Gaps:90/281 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 RQRLVHRYTKVLNKEEGAIRLVGGDNEYEGNIEVLHNGKWGAVCDDEWDSTEADIVCRQLGFPGM 107
            |:.|..|..:::  :||.:||||.... .|.:||.|:|:||.||||.||..||.:|||||||||.
Zfish    16 RRTLFDRPKQLM--QEGRVRLVGVIPS-SGRVEVYHDGQWGTVCDDGWDLAEAQVVCRQLGFPGA 77

  Fly   108 RRYTRSGFFGPARRRFWMDNLFCEGHEQELVDCHFEGWGENDCEPGEAAGVVCYPPENALIPMAT 172
            ......|.:|....|.|:|::.|:|.|..|.:|.|:|||.:||...|.|||:|.|.:|      |
Zfish    78 VSVATGGQYGEGSGRVWLDDMNCKGSESLLSECSFKGWGVSDCTHKEDAGVICAPGKN------T 136

  Fly   173 PIIRDEDLPKYPIHSRSRLYVRLRGGRSRIEGRVEVSLDGGRWGSVCADGWSLLEANVVCRQLGL 237
            ..||                      :..::..:.:|.|                       |||
Zfish   137 TSIR----------------------QMSVDNSLGLSDD-----------------------LGL 156

  Fly   238 GYASEAFQTDFFGGFNVSRPVLSGSECYGNETELADCLHHDASQGIISCHGNRQHVAAVICDYIA 302
            .:.||       .|.:.:..|...||    |.||..|:|.                   :...|.
Zfish   157 LFDSE-------DGCDFTIAVRDLSE----EAELTFCVHR-------------------VILMIY 191

  Fly   303 PDLVVDY------LEIEQTAH 317
            |:|.:.:      ::|.||.|
Zfish   192 PELNLTHDTRNITVDISQTCH 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl2NP_523806.2 SR 61..161 CDD:214555 48/99 (48%)
SR 193..298 CDD:214555 16/104 (15%)
Lysyl_oxidase 303..506 CDD:460102 6/21 (29%)
lgals3bp.1NP_998038.1 SR 32..130 CDD:214555 48/98 (49%)
BTB_POZ 158..257 CDD:453885 18/85 (21%)
BACK_LGALS3BP 266..339 CDD:350571
Blue background indicates that the domain is not in the aligned region.

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