DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Loxl2 and loxa

DIOPT Version :10

Sequence 1:NP_523806.2 Gene:Loxl2 / 37485 FlyBaseID:FBgn0034660 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_996972.1 Gene:loxa / 404621 ZFINID:ZDB-GENE-040426-2398 Length:408 Species:Danio rerio


Alignment Length:209 Identity:89/209 - (42%)
Similarity:134/209 - (64%) Gaps:6/209 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   303 PDLVVDYLEIEQTAHLEDRPMLLMQCAMEENCVANEAYQIQRDDPHWRYRSRRLLKFTAAAINAG 367
            ||||.|...|:.:.:::..||..::||.||||:|:.||:....|    |..|.||:|.....|.|
Zfish   204 PDLVGDPYYIQASTYVQRVPMYNLRCAAEENCLASSAYRSSVRD----YDMRMLLRFPQRVKNQG 264

  Fly   368 NADFRPFKEKSQWEWHMCHMHFHSMEVFATFDIFN-LRGIKVAQGHKASFCLEDSNCLPGVAKKY 431
            .:||.|.:.:..||||.||.|:|||:.|:.:|:.: ....:||:||||||||||::|..|..::|
Zfish   265 TSDFLPSRPRYTWEWHSCHQHYHSMDEFSHYDLLDATTHRRVAEGHKASFCLEDTSCDYGYYRRY 329

  Fly   432 NCANYGDQGISINCSDVYLYNLDCQWVDVTDLIPGTYVLKIAINPEFKVAEMNYDNNAAICDLIY 496
            .|.:: .||:|..|.|.|..::||||:|:||:.||.|:||:::||.::|.|.:|.||...||:.|
Zfish   330 ACTSH-TQGLSPGCYDTYNADIDCQWIDITDVKPGNYILKVSVNPSYQVPESDYSNNVVRCDVRY 393

  Fly   497 TANFARVQNCQLGR 510
            |.|:|.|..|.:.:
Zfish   394 TGNYAYVSGCHISQ 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl2NP_523806.2 SR 61..161 CDD:214555
SR 193..298 CDD:214555
Lysyl_oxidase 303..506 CDD:460102 88/203 (43%)
loxaNP_996972.1 Lysyl_oxidase 204..403 CDD:460102 88/203 (43%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.