DRSC/TRiP Functional Genomics Resources

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Protein Alignment Loxl2 and Nuggc

DIOPT Version :10

Sequence 1:NP_523806.2 Gene:Loxl2 / 37485 FlyBaseID:FBgn0034660 Length:511 Species:Drosophila melanogaster
Sequence 2:XP_008769028.1 Gene:Nuggc / 290325 RGDID:1562099 Length:796 Species:Rattus norvegicus


Alignment Length:232 Identity:46/232 - (19%)
Similarity:74/232 - (31%) Gaps:92/232 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 EYEGNIEVLHNGKWGAVCDD--------EWDSTEADIVCRQLGFPGMRRYTRSGFFGPARRRFWM 125
            :||..|.:|.:.:|.|...|        ||...|.           ...:.|......|.|:..|
  Rat   149 QYEAKIHLLSDQEWKAELKDLTKLLHRAEWSGEEE-----------AETWDRDDAAAEAARKLQM 202

  Fly   126 DNLFCEG----HEQEL--------------VDCHFEGWGENDCE------------PGEAAGVVC 160
              |:..|    |.::|              :....|..||...:            .||:|....
  Rat   203 --LYGHGADRKHYEDLLRMKPRGRIPTSRTITLKAEEAGELSVKLDPFIRTQRRDWDGESAETPI 265

  Fly   161 YP---------PENALIPMATPII-----------RDEDLPKYPIHSRSRLYV-----RLRGGRS 200
            :|         |:::|||....::           ||| :.|..|...|.::|     |:.||::
  Rat   266 WPLIKYVEVILPKSSLIPEGVVLVDIPGTGDFNSKRDE-MWKKTIDKCSMIWVISDIERVSGGKA 329

  Fly   201 RIEGRVEVSLDGGRWGSVCADGWSLLEANVVCRQLGL 237
            . |..:..|:      ..|..|:        ||.:.|
  Rat   330 H-EDLLSESI------KACQRGF--------CRDIAL 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl2NP_523806.2 SR 61..161 CDD:214555 24/129 (19%)
SR 193..298 CDD:214555 11/50 (22%)
Lysyl_oxidase 303..506 CDD:460102
NuggcXP_008769028.1 GTPase_YqeH <80..>123 CDD:213834
Dynamin_N 103..>172 CDD:459775 7/22 (32%)
P-loop containing Nucleoside Triphosphate Hydrolases 275..450 CDD:476819 21/93 (23%)
Blue background indicates that the domain is not in the aligned region.

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