DRSC/TRiP Functional Genomics Resources

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Protein Alignment Loxl2 and SCARA5

DIOPT Version :9

Sequence 1:NP_523806.2 Gene:Loxl2 / 37485 FlyBaseID:FBgn0034660 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_776194.2 Gene:SCARA5 / 286133 HGNCID:28701 Length:495 Species:Homo sapiens


Alignment Length:100 Identity:45/100 - (45%)
Similarity:59/100 - (59%) Gaps:0/100 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 IRLVGGDNEYEGNIEVLHNGKWGAVCDDEWDSTEADIVCRQLGFPGMRRYTRSGFFGPARRRFWM 125
            ||||.|...:||.:||.|:.:||.||||.||..:.|:|||.|||.|:....|:..||....|.||
Human   393 IRLVNGSGPHEGRVEVYHDRRWGTVCDDGWDKKDGDVVCRMLGFRGVEEVYRTARFGQGTGRIWM 457

  Fly   126 DNLFCEGHEQELVDCHFEGWGENDCEPGEAAGVVC 160
            |::.|:|.|:.:..|.|..||..:|...|.|.|.|
Human   458 DDVACKGTEETIFRCSFSKWGVTNCGHAEDASVTC 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl2NP_523806.2 SR 61..161 CDD:214555 44/99 (44%)
SRCR 66..160 CDD:278931 40/93 (43%)
SR 193..298 CDD:214555
SRCR 198..298 CDD:278931
Lysyl_oxidase 303..503 CDD:279521
SCARA5NP_776194.2 MscS_porin <89..>191 CDD:403869
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 301..386
Collagen 318..373 CDD:396114
SR 393..493 CDD:214555 44/99 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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