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Protein Alignment Loxl2 and Ssc5d

DIOPT Version :9

Sequence 1:	NP_523806.2	Gene:	Loxl2 / 37485	FlyBaseID:	FBgn0034660	Length:	511	Species:	Drosophila melanogaster
Sequence 2:	NP_766596.1	Gene:	Ssc5d / 269855	MGIID:	3606211	Length:	1371	Species:	Mus musculus

Alignment Length:	265	Identity:	96/265 - (36%)
Similarity:	122/265 - (46%)	Gaps:	45/265 - (16%)

- Green bases have known domain annotations that are detailed below.

  Fly    61 IRLVGGDNEYEGNIEVLHNGKWGAVCDDEWDSTEADIVCRQLGFPGMRRYTRSGFFGPARRRFWM 125
            :|||.|.:...|.:||.|.|:||.||||.||..:|.:.||:||..|.........|||.....||
Mouse   199 LRLVSGPHGCAGRLEVWHGGRWGTVCDDGWDLRDAAVACRELGCGGALAAPGGARFGPGEGPVWM 263

  Fly   126 DNLFCEGHEQELVDCHFEGWGENDCEPGEAAGVVCYPPENALIPMATPIIRDEDLPKYPIHSRSR 190
            |::.|.|.|:.|.||....||.::|:..|.||:||..|                .|:
Mouse   264 DDVGCGGGEEALRDCPRSPWGRSNCDHTEDAGLVCTGP----------------APR-------- 304

  Fly   191 LYVRLRGGRSRIEGRVEVSLDGGRWGSVCADGWSLLEANVVCRQLGLGYASEAFQTDFFGGFNVS 255
              :||..|.....||:|| ..||||||||.|.|.|.:|.|.|::||.|.|..|....|||. ...
Mouse   305 --IRLADGPHGCAGRLEV-WHGGRWGSVCDDAWDLRDAAVACKELGCGGALAAPGGAFFGE-GTG 365

  Fly   256 RPVLSGSECYGNETELADCL-----HHDASQGIISCHGNRQHVAAVICDYI---APDLVVDYLEI 312
            ..:|....|.||||.|..|.     .||       || :|:...|| ||.:   |....|..::.
Mouse   366 PIILDDLRCRGNETALRFCPARPWGQHD-------CH-HREDAGAV-CDGMPLGAVQPTVPAVDS 421

  Fly   313 EQTAH 317
            ..|||
Mouse   422 NSTAH 426

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.