DRSC/TRiP Functional Genomics Resources

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Protein Alignment Loxl2 and Lgals3bp

DIOPT Version :10

Sequence 1:NP_523806.2 Gene:Loxl2 / 37485 FlyBaseID:FBgn0034660 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_620796.2 Gene:Lgals3bp / 245955 RGDID:620837 Length:574 Species:Rattus norvegicus


Alignment Length:450 Identity:108/450 - (24%)
Similarity:162/450 - (36%) Gaps:122/450 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 EEGAIRLVGGDNEYEGNIEVLHNGKWGAVCDDEWDSTEADIVCRQLGFPGMRRYTRSGFFGPARR 121
            ::|.:|||.|.:..||.:|:.:.|:||.|||:.|:..:|.:|||.||:....:......|||.:.
  Rat    20 KDGDMRLVNGASASEGRVEIFYRGRWGTVCDNLWNLLDAHVVCRALGYENATQALSRAAFGPGKG 84

  Fly   122 RFWMDNLFCEGHEQELVDCHFEGWGENDCEPGEAAGVVCYPPENAL--------IPMATPIIRDE 178
            ...:|.:.|.|:|..|.:|...||..:.|...:.|||||......:        :|.|...|.|.
  Rat    85 PIMLDEVECTGNESSLANCSSLGWMVSHCGHEKDAGVVCSNDSRGIHILDLSGELPDALGQIFDS 149

  Fly   179 DLPKYPIHSRSRLYVRLRGGRSRIEGRVEVSLDGGRWGSVCADG------------WSLLEANVV 231
                   .....|::::.|     :|..::||        ||..            |.::.::|:
  Rat   150 -------QQDCDLFIQVTG-----QGHGDLSL--------CAHTLILRTNPEAQALWQVVGSSVI 194

  Fly   232 CRQLGLGYASEAFQT--DFFGGFNVSRPVLSGSECYGNETELADCLHHDAS-QGIISCHG--NRQ 291
            .|     ..:|....  ||...|...|..:|.|.        ..|||..|| .|.....|  .|.
  Rat   195 MR-----VDAECMPVVRDFLRYFYSRRIEVSMSS--------VKCLHKLASAYGATELQGYCGRL 246

  Fly   292 HV------------------AAVICDYIAPDLVVDYL--EIEQTAHLE---DRPMLLMQCAM--E 331
            .|                  |....|.:..||.|.:|  ..|.....|   ..|..|:|..:  .
  Rat   247 FVTLLPQDPTFHTPLELYEYAQATGDSVLEDLCVQFLAWNFEPLTQAEAWLSVPNALIQALLPKS 311

  Fly   332 ENCVANEAYQIQRDDPHWRYRSRRLLKFTAAAINAGNADFRPFKEKSQWEWHMCHMHFHSMEVFA 396
            |..|::|...::..| .|           :.|..|.:.|.....|:         :.|..|....
  Rat   312 ELAVSSELDLLKAVD-QW-----------STATGASHGDVERLVEQ---------IRFPMMLPQE 355

  Fly   397 TFDI-FNLRGIKVAQGHKASF------CLEDSNCLPGVAKKYNCANYGDQGISINCSDVY 449
            .|:: |||   .:.|||:|.|      .||.......|..||...|..:        |||
  Rat   356 LFELQFNL---SLYQGHQALFQRKTMEALEFHTVPLKVLAKYRSLNLTE--------DVY 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl2NP_523806.2 SR 61..161 CDD:214555 36/99 (36%)
SR 193..298 CDD:214555 26/139 (19%)
Lysyl_oxidase 303..506 CDD:460102 37/160 (23%)
Lgals3bpNP_620796.2 SR 24..124 CDD:214555 36/99 (36%)
BTB_POZ 136..247 CDD:453885 29/143 (20%)
BACK 256..329 CDD:475122 16/84 (19%)

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