DRSC/TRiP Functional Genomics Resources

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Protein Alignment Loxl2 and Scart2

DIOPT Version :9

Sequence 1:NP_523806.2 Gene:Loxl2 / 37485 FlyBaseID:FBgn0034660 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_001121618.1 Gene:Scart2 / 244234 MGIID:2443685 Length:1112 Species:Mus musculus


Alignment Length:400 Identity:115/400 - (28%)
Similarity:147/400 - (36%) Gaps:138/400 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KVLKMGLTLV-CL----TLLAIHMADAVVQHR-SLEDARQERQRLVHRYTKVLNKEEGAIRLVGG 66
            |.:.:||:|| ||    .|...:::.:::.|. :|.||.......:|            |||..|
Mouse   620 KTIPVGLSLVHCLGSETHLTQCNVSASLLVHAGTLRDAGVVCSGSLH------------IRLAAG 672

  Fly    67 DNEYEGNIEVLHNGKWGAVCDDEWDSTEADIVCRQLGFPGMRRYTRSGFFGPARRRFWMDNLFCE 131
            .|...|.:||.:.|.||.||||.||..:|.:||||||........|:..||....|.|||.|.|.
Mouse   673 KNRCAGRVEVFYQGTWGTVCDDAWDLQDAHVVCRQLGCGHALSAPRAAHFGAGTGRIWMDELGCM 737

  Fly   132 GHEQELVDCHFEGWGENDCEPGEAAGVVCYP---------------------------------- 162
            |.|..|.:|...|||:.||...|.|||:|..                                  
Mouse   738 GEEAALWECQSGGWGQQDCGHKEDAGVICSEFIDVRLQEHSQPCTGRLEVFYNGTWGGVCQSLNA 802

  Fly   163 -------------PENALI--PMATPII----------RDE------DLPKYPIHSRSRL----- 191
                         .:..|:  |..:..|          ||:      ..|..|.:..|.|     
Mouse   803 ASLRVLCEHLGCGSQGQLLARPRGSSTIETVWLKSIQCRDKHDMSLWQCPSEPWNRHSCLRGEEA 867

  Fly   192 ------------------------------YVRLRGGRSRIEGRVEVSLDGGRWGSVCADGWSLL 226
                                          .:|:.||.:...||||: ..||.||:||.|.|.|.
Mouse   868 WLACAEKTEVSQDMEQIANCSSTLSCPEEGALRVLGGENGCSGRVEL-WHGGSWGTVCDDSWDLA 931

  Fly   227 EANVVCRQLGLGYASEAFQTDFFG-GFNVSRPV-LSGSECYGNETEL----------ADCLH-HD 278
            :|.|||||||.|.|..|.|...|| |   |.|| |....|.|:|..|          .||.| .|
Mouse   932 DAEVVCRQLGCGPAIAALQNAAFGPG---SGPVWLDEVGCRGSELSLGACQAEPWGYGDCSHKED 993

  Fly   279 ASQGIISCHG 288
            |.   :.|.|
Mouse   994 AG---VRCLG 1000

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl2NP_523806.2 SR 61..161 CDD:214555 46/99 (46%)
SRCR 66..160 CDD:278931 43/93 (46%)
SR 193..298 CDD:214555 45/108 (42%)
SRCR 198..298 CDD:278931 43/103 (42%)
Lysyl_oxidase 303..503 CDD:279521
Scart2NP_001121618.1 SR 33..130 CDD:214555
SRCR <162..233 CDD:366150
SR 355..452 CDD:214555
SR 457..556 CDD:214555
SR 562..662 CDD:214555 12/41 (29%)
SR 667..767 CDD:214555 46/99 (46%)
SR 899..999 CDD:214555 44/106 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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