DRSC/TRiP Functional Genomics Resources

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Protein Alignment Loxl2 and Lgals3bp

DIOPT Version :9

Sequence 1:NP_523806.2 Gene:Loxl2 / 37485 FlyBaseID:FBgn0034660 Length:511 Species:Drosophila melanogaster
Sequence 2:XP_036012322.1 Gene:Lgals3bp / 19039 MGIID:99554 Length:609 Species:Mus musculus


Alignment Length:428 Identity:103/428 - (24%)
Similarity:158/428 - (36%) Gaps:98/428 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 EEGAIRLVGGDNEYEGNIEVLHNGKWGAVCDDEWDSTEADIVCRQLGFPGMRRYTRSGFFGPARR 121
            |:|.:|||.|.:..||.:|:.:.|:||.|||:.|:..:|.:|||.||:....:......|||.:.
Mouse    52 EDGDMRLVNGASANEGRVEIFYRGRWGTVCDNLWNLLDAHVVCRALGYENATQALGRAAFGPGKG 116

  Fly   122 RFWMDNLFCEGHEQELVDCHFEGWGENDCEPGEAAGVVCYPPENAL-IPMATPIIRDEDLPKYPI 185
            ...:|.:.|.|.|..|..|...||..:.|...:.|||||......| |...:..:.|.....:..
Mouse   117 PIMLDEVECTGTESSLASCRSLGWMVSRCGHEKDAGVVCSNDTTGLHILDLSGELSDALGQIFDS 181

  Fly   186 HSRSRLYVRLRGGRSRIEGRVEVSLDGGRWGSVCADG------------WSLLEANVVCRQLGLG 238
            .....|::::.|     :|..::||        ||..            |.::.::|:.|     
Mouse   182 QQGCDLFIQVTG-----QGYEDLSL--------CAHTLILRTNPEAQALWQVVGSSVIMR----- 228

  Fly   239 YASEAFQT--DFFGGFNVSRPVLSGSECYGNETELADCLHHDASQGIISCHGNRQHVAAVICDYI 301
            ..:|....  ||...|...|..:|.|.        ..|||.     :.|.:|     |..:.||.
Mouse   229 VDAECMPVVRDFLRYFYSRRIEVSMSS--------VKCLHK-----LASAYG-----ATELQDYC 275

  Fly   302 APDLVVDYLEIEQTAHLEDRPMLLMQCA-------MEENCVANEAYQIQRDDPHWRYRS------ 353
            . .|....|..:.|.|   .|:.|...|       :|:.||...|:..   :|..:..|      
Mouse   276 G-RLFATLLPQDPTFH---TPLDLYAYARATGDSMLEDLCVQFLAWNF---EPLTQSESWSAVPT 333

  Fly   354 ---RRLLKFTAAAINAGNADFRPFKEKSQWEWHMCHMH-----------FHSMEVFATFDI-FNL 403
               :.||..:..|:   :::....|...||.......|           |..|.....|:: |||
Mouse   334 TLIQALLPKSELAV---SSELDLLKAVDQWSTETIASHEDIERLVEQVRFPMMLPQELFELQFNL 395

  Fly   404 RGIKVAQGHKASF------CLEDSNCLPGVAKKYNCAN 435
               .:.|.|:|.|      .||.......|..||...|
Mouse   396 ---SLYQDHQALFQRKTMQALEFHTVPVEVLAKYKGLN 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl2NP_523806.2 SR 61..161 CDD:214555 36/99 (36%)
SRCR 66..160 CDD:278931 32/93 (34%)
SR 193..298 CDD:214555 22/118 (19%)
SRCR 198..298 CDD:278931 21/113 (19%)
Lysyl_oxidase 303..503 CDD:279521 36/167 (22%)
Lgals3bpXP_036012322.1 SR 56..156 CDD:214555 36/99 (36%)
BTB_POZ 168..279 CDD:365784 26/147 (18%)
BACK 288..361 CDD:421692 16/81 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847088
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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