DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Loxl2 and Lgals3bp

DIOPT Version :10

Sequence 1:NP_523806.2 Gene:Loxl2 / 37485 FlyBaseID:FBgn0034660 Length:511 Species:Drosophila melanogaster
Sequence 2:XP_036012322.1 Gene:Lgals3bp / 19039 MGIID:99554 Length:609 Species:Mus musculus


Alignment Length:428 Identity:103/428 - (24%)
Similarity:158/428 - (36%) Gaps:98/428 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 EEGAIRLVGGDNEYEGNIEVLHNGKWGAVCDDEWDSTEADIVCRQLGFPGMRRYTRSGFFGPARR 121
            |:|.:|||.|.:..||.:|:.:.|:||.|||:.|:..:|.:|||.||:....:......|||.:.
Mouse    52 EDGDMRLVNGASANEGRVEIFYRGRWGTVCDNLWNLLDAHVVCRALGYENATQALGRAAFGPGKG 116

  Fly   122 RFWMDNLFCEGHEQELVDCHFEGWGENDCEPGEAAGVVCYPPENAL-IPMATPIIRDEDLPKYPI 185
            ...:|.:.|.|.|..|..|...||..:.|...:.|||||......| |...:..:.|.....:..
Mouse   117 PIMLDEVECTGTESSLASCRSLGWMVSRCGHEKDAGVVCSNDTTGLHILDLSGELSDALGQIFDS 181

  Fly   186 HSRSRLYVRLRGGRSRIEGRVEVSLDGGRWGSVCADG------------WSLLEANVVCRQLGLG 238
            .....|::::.|     :|..::||        ||..            |.::.::|:.|     
Mouse   182 QQGCDLFIQVTG-----QGYEDLSL--------CAHTLILRTNPEAQALWQVVGSSVIMR----- 228

  Fly   239 YASEAFQT--DFFGGFNVSRPVLSGSECYGNETELADCLHHDASQGIISCHGNRQHVAAVICDYI 301
            ..:|....  ||...|...|..:|.|.        ..|||.     :.|.:|     |..:.||.
Mouse   229 VDAECMPVVRDFLRYFYSRRIEVSMSS--------VKCLHK-----LASAYG-----ATELQDYC 275

  Fly   302 APDLVVDYLEIEQTAHLEDRPMLLMQCA-------MEENCVANEAYQIQRDDPHWRYRS------ 353
            . .|....|..:.|.|   .|:.|...|       :|:.||...|:..   :|..:..|      
Mouse   276 G-RLFATLLPQDPTFH---TPLDLYAYARATGDSMLEDLCVQFLAWNF---EPLTQSESWSAVPT 333

  Fly   354 ---RRLLKFTAAAINAGNADFRPFKEKSQWEWHMCHMH-----------FHSMEVFATFDI-FNL 403
               :.||..:..|:   :::....|...||.......|           |..|.....|:: |||
Mouse   334 TLIQALLPKSELAV---SSELDLLKAVDQWSTETIASHEDIERLVEQVRFPMMLPQELFELQFNL 395

  Fly   404 RGIKVAQGHKASF------CLEDSNCLPGVAKKYNCAN 435
               .:.|.|:|.|      .||.......|..||...|
Mouse   396 ---SLYQDHQALFQRKTMQALEFHTVPVEVLAKYKGLN 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl2NP_523806.2 SR 61..161 CDD:214555 36/99 (36%)
SR 193..298 CDD:214555 22/118 (19%)
Lysyl_oxidase 303..506 CDD:460102 36/167 (22%)
Lgals3bpXP_036012322.1 SR 56..156 CDD:214555 36/99 (36%)
BTB_POZ 168..279 CDD:453885 26/147 (18%)
BACK 288..361 CDD:475122 16/81 (20%)

Return to query results.
Submit another query.