DRSC/TRiP Functional Genomics Resources

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Protein Alignment Loxl2 and Cd5l

DIOPT Version :9

Sequence 1:NP_523806.2 Gene:Loxl2 / 37485 FlyBaseID:FBgn0034660 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_033820.2 Gene:Cd5l / 11801 MGIID:1334419 Length:352 Species:Mus musculus


Alignment Length:224 Identity:79/224 - (35%)
Similarity:105/224 - (46%) Gaps:37/224 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 IRLVGGDNEYEGNIEVLHNGKWGAVCDDEWDSTEADIVCRQLGFPGMRRYTRSGFFGP--ARRRF 123
            ::||||.:..||.:||.|||:||.||||.||..:..:|||:|....:.:..|...:.|  :.:|.
Mouse    27 VQLVGGAHRCEGRVEVEHNGQWGTVCDDGWDRRDVAVVCRELNCGAVIQTPRGASYQPPASEQRV 91

  Fly   124 WMDNLFCEGHEQELVDCHFEGWGENDCEPGEAAGVVCYPPENAL--IPMATPIIRDEDLPKYPIH 186
            .:..:.|.|.|..|..|.. .:...||...|.||..|..|::.|  ||        ||       
Mouse    92 LIQGVDCNGTEDTLAQCEL-NYDVFDCSHEEDAGAQCENPDSDLLFIP--------ED------- 140

  Fly   187 SRSRLYVRLRGGRSRIEGRVEVSLDGGRWGSVCADGWSLLEANVVCRQLGLGYASEAFQTDFFGG 251
                  |||..|....:||||| |...:|.:||..||:|..:.|||||||.|   .|..|  :|.
Mouse   141 ------VRLVDGPGHCQGRVEV-LHQSQWSTVCKAGWNLQVSKVVCRQLGCG---RALLT--YGS 193

  Fly   252 FNVSR----PVLSGS-ECYGNETELADCL 275
            .|.:.    |:..|. .|.|.|..|..||
Mouse   194 CNKNTQGKGPIWMGKMSCSGQEANLRSCL 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl2NP_523806.2 SR 61..161 CDD:214555 36/101 (36%)
SRCR 66..160 CDD:278931 33/95 (35%)
SR 193..298 CDD:214555 36/88 (41%)
SRCR 198..298 CDD:278931 33/83 (40%)
Lysyl_oxidase 303..503 CDD:279521
Cd5lNP_033820.2 SR 27..127 CDD:214555 36/100 (36%)
SRCR 32..128 CDD:278931 33/96 (34%)
SR 141..240 CDD:214555 36/88 (41%)
SRCR 146..241 CDD:278931 33/83 (40%)
SR 246..348 CDD:214555
SRCR 251..348 CDD:278931
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847087
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000389
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.930

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