DRSC/TRiP Functional Genomics Resources

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Protein Alignment Loxl2 and LOC101733498

DIOPT Version :9

Sequence 1:NP_523806.2 Gene:Loxl2 / 37485 FlyBaseID:FBgn0034660 Length:511 Species:Drosophila melanogaster
Sequence 2:XP_031761233.1 Gene:LOC101733498 / 101733498 -ID:- Length:900 Species:Xenopus tropicalis


Alignment Length:259 Identity:101/259 - (38%)
Similarity:131/259 - (50%) Gaps:23/259 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 EEGAIRLVGGDNEYEGNIEVLHNGKWGAVCDDEWDSTEADIVCRQLGFPGMRRYTRSGFFGPARR 121
            |.|:||||.|....||.:|:.:||.||.||||.|:...|.:|||||.....:......|||..:.
 Frog   407 EPGSIRLVNGGGRCEGRVEIYYNGTWGTVCDDLWNMNNARVVCRQLHCGEPKDAKIKAFFGSGKE 471

  Fly   122 RFWMDNLFCEGHEQELVDCHFEGWGENDCEPGEAAGVVC-------YPPENA------LIPMA-T 172
            |.||||:.|:|.|..|.||:|.|||.:||...|.|.|||       |..:.|      ::|.: |
 Frog   472 RIWMDNVECDGSENALNDCNFPGWGLHDCSHNEDAAVVCSDQAASVYNEDTAKTTSKPVLPASGT 536

  Fly   173 PIIRDEDLPKYPIHSRSRL---YVRLRGGRSRIEGRVEVSLDGGRWGSVCADGWSLLEANVVCRQ 234
            |.......|:.|.||....   .:||..|..|.|||||:..: |.||:||.|.|::..|.|||||
 Frog   537 PDKSHHLSPESPQHSPVATEPGSIRLVNGGGRCEGRVEIYYN-GTWGTVCDDLWNMSSARVVCRQ 600

  Fly   235 LGLGYASEAFQTDFFGGFNVSRPVLSGSECYGNETELADCLHHDASQGIISCHGNRQHVAAVIC 298
            |..|...:|.:..|||....| ..:...||.|:|..|.||  :....|:..|..|..  |.|:|
 Frog   601 LHCGEPKDAKKDAFFGSGEES-IWMDNVECDGSENALNDC--NFRGWGLHDCSHNED--AGVVC 659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl2NP_523806.2 SR 61..161 CDD:214555 48/106 (45%)
SRCR 66..160 CDD:278931 42/93 (45%)
SR 193..298 CDD:214555 41/104 (39%)
SRCR 198..298 CDD:278931 39/99 (39%)
Lysyl_oxidase 303..503 CDD:279521
LOC101733498XP_031761233.1 SR 23..123 CDD:214555
SR 176..276 CDD:214555
SR 411..511 CDD:214555 47/99 (47%)
SR 560..660 CDD:214555 42/106 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000389
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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