DRSC/TRiP Functional Genomics Resources

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Protein Alignment Loxl2 and LOC101733428

DIOPT Version :9

Sequence 1:NP_523806.2 Gene:Loxl2 / 37485 FlyBaseID:FBgn0034660 Length:511 Species:Drosophila melanogaster
Sequence 2:XP_031746768.1 Gene:LOC101733428 / 101733428 -ID:- Length:3046 Species:Xenopus tropicalis


Alignment Length:351 Identity:113/351 - (32%)
Similarity:147/351 - (41%) Gaps:99/351 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 EGA---IRLVGGDNEYEGNIEVLHNGKWGAVCDDEWDSTEADIVCRQLGFPGMRRY--TRSGFFG 117
            :||   :||:|||||.||.:||.|.|.||.||..:|.:.||.:||||||......|  |::.|||
 Frog  1918 QGADENVRLIGGDNECEGRVEVKHQGTWGTVCGRQWGAKEASVVCRQLGCNTSNEYFSTKATFFG 1982

  Fly   118 PARRRFWMDNLFCEGHEQELVDCHFEGWGENDCEPGEAAGVVCY-PPENALIPMATPIIRDEDLP 181
            ....|.|:.|:.|.|.|..|..|....||...|:..|..||:|. .||.                
 Frog  1983 AGSGRIWLSNVKCTGDEPSLAWCMHNTWGIEKCDHTEDVGVICTGEPEE---------------- 2031

  Fly   182 KYPIHSRSRLYVRLRGGRSRIEGRVEVSLDGGRWGSVCADGWSLLEANVVCRQLGLGYASEA--- 243
                       :||.||.:..||||||. ..|.||:||...|:...|:|||||||....:|.   
 Frog  2032 -----------LRLVGGNNECEGRVEVK-HRGVWGAVCDHNWNQKAASVVCRQLGCNNTTEGQMK 2084

  Fly   244 FQTDFFG--GFNVSRPVLSGSECYGNETELADCLH---------HDASQGIISCHGNRQHVAAV- 296
            .|..|||  ..|:|   ||..:|.|.|..|.:|.|         |.|..|:| |.|....:..| 
 Frog  2085 AQAAFFGQSSRNIS---LSRVKCTGEEAVLWECQHQMWGLSNCLHRADVGVI-CKGEPDLLRLVG 2145

  Fly   297 -------------------ICDYI----APDLVVDYL----EIEQTAHLEDRP---------MLL 325
                               :||..    |.::|...|    ..|.|||::..|         :..
 Frog  2146 GGTNCAGRVEVKHRGEWGTVCDDFWNENAAEVVCRQLGCSTSYEDTAHIKATPFGAASGKIWLSR 2210

  Fly   326 MQCAMEENCVANEAYQIQRDDPH--W 349
            ::|..||:.:        ||..|  |
 Frog  2211 VRCKGEESSL--------RDCDHNMW 2228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl2NP_523806.2 SR 61..161 CDD:214555 45/101 (45%)
SRCR 66..160 CDD:278931 42/95 (44%)
SR 193..298 CDD:214555 46/138 (33%)
SRCR 198..298 CDD:278931 43/133 (32%)
Lysyl_oxidase 303..503 CDD:279521 14/62 (23%)
LOC101733428XP_031746768.1 SRCR <2..36 CDD:395421
SR 42..139 CDD:214555
SR 146..249 CDD:214555
SR 255..352 CDD:214555
SR 359..460 CDD:214555
SR 467..568 CDD:214555
SR 574..676 CDD:214555
SR 682..785 CDD:214555
SR 791..892 CDD:214555
SR 899..1001 CDD:214555
SR 1008..1109 CDD:214555
SR 1116..1218 CDD:214555
SR 1225..1326 CDD:214555
SR 1332..1436 CDD:214555
SR 1443..1543 CDD:214555
SR 1609..1708 CDD:214555
SR 1716..1813 CDD:214555
SR 1820..1918 CDD:214555 113/351 (32%)
SR 1924..2026 CDD:214555 45/101 (45%)
SR 2032..2134 CDD:214555 43/106 (41%)
SR 2141..2243 CDD:214555 18/96 (19%)
SR 2250..2341 CDD:214555
SR 2359..2457 CDD:214555
SR 2570..2670 CDD:214555
SR 2675..2775 CDD:214555
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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