DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4021 and AT5G51300

DIOPT Version :10

Sequence 1:NP_611610.2 Gene:CG4021 / 37484 FlyBaseID:FBgn0034659 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_199943.1 Gene:AT5G51300 / 835204 AraportID:AT5G51300 Length:804 Species:Arabidopsis thaliana


Alignment Length:431 Identity:91/431 - (21%)
Similarity:145/431 - (33%) Gaps:189/431 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 THEYQPRLNEIAQKFLADLDEERQRLSAEFPLCALLIDEARDRVYATGRIPGKELYADVYRQKPM 82
            |.||:.|         ..|:.|||.:.|:.                ..:.|..:..|| ||  |.
plant   203 TREYRAR---------ERLNRERQEIIAQI----------------IKKNPAFKPPAD-YR--PP 239

  Fly    83 KIIQKVFVPVNQYPKFNFAGKILGPKGNSLRRLQEETQCKIALKGRSSMRD--RNKEEELRSDPR 145
            |:.:|:|:|:.::|.:||.|.|:||:||:.:|::.||..||.::|:.|:::  ..::::|:.|| 
plant   240 KLHKKLFIPMKEFPGYNFIGLIIGPRGNTQKRMERETGAKIVIRGKGSVKEGRHQQKKDLKYDP- 303

  Fly   146 YAHLQKNLFLEVSTVAIPAECHSRIAYALAEIRKYLIPDNNDEVSHE----QLRELMEID----- 201
                .:|   |...|.:.||....:..|...:.|.|.|  .|||.:|    |||||..::     
plant   304 ----SEN---EDLHVLVEAETQEALEAAAGMVEKLLQP--VDEVLNEHKRQQLRELATLNGTIRD 359

  Fly   202 -----------------PESAKNFKGLNL-------------------------EAYR------- 217
                             |.....||...|                         :.|:       
plant   360 EEFCRLCGEPGHRQYACPSRTNTFKSDVLCKICGDGGHPTIDCPVKGTTGKKMDDEYQNFLAELG 424

  Fly   218 ------SVRDS---------------------NGASKYINLIKRVAENPSKVADMEQVDYDYDEH 255
                  |::.|                     ||||.:..|.....:.|||         :|||.
plant   425 GTVPESSLKQSATLALGPGSSGSNPPWANNAGNGASAHPGLGSTPTKPPSK---------EYDET 480

  Fly   256 H-----MPPI---------------------------HLPTGYEY----SIQRPSKIVAKF---- 280
            :     :||:                           .|..||.:    .:|..:..|...    
plant   481 NLYIGFLPPMLEDDGLINLFSSFGEIVMAKVIKDRVTGLSKGYGFVKYADVQMANTAVQAMNGYR 545

  Fly   281 ------------KRPYPYPTDMKPVREPPIKFYKPN---PG 306
                        |.|.|......|..:||.:.|.|:   ||
plant   546 FEGRTLAVRIAGKSPPPIAPPGPPAPQPPTQGYPPSNQPPG 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4021NP_611610.2 KH-I_KHDRBS 80..179 CDD:411812 30/100 (30%)
AT5G51300NP_199943.1 MSL5 <157..360 CDD:227503 56/194 (29%)
KH-I_BBP 240..333 CDD:411805 30/100 (30%)
PTZ00368 <363..405 CDD:173561 4/41 (10%)
PABP-1234 <481..673 CDD:130689 17/106 (16%)
RRM 481..556 CDD:440488 7/74 (9%)

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