DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4021 and khdrbs2

DIOPT Version :10

Sequence 1:NP_611610.2 Gene:CG4021 / 37484 FlyBaseID:FBgn0034659 Length:319 Species:Drosophila melanogaster
Sequence 2:XP_073776079.1 Gene:khdrbs2 / 768147 ZFINID:ZDB-GENE-061013-497 Length:350 Species:Danio rerio


Alignment Length:318 Identity:104/318 - (32%)
Similarity:152/318 - (47%) Gaps:81/318 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 KFLADLDEERQRLSAEFPLCALLIDEARDRVYATGRIPGKEL--------YADVYRQKPMKIIQK 87
            |:|.:|..|::.|.|.|.....|:.|..:      :..|.||        |.|:...|.:|:.::
Zfish     5 KYLPELVAEKESLDASFVHAMRLLAEEIE------KFEGDELRKDGEVKKYLDIISNKNIKLSER 63

  Fly    88 VFVPVNQYPKFNFAGKILGPKGNSLRRLQEETQCKIALKGRSSMRDRNKEEELR--SDPRYAHLQ 150
            |.:||.|||||||.||:|||:|||::||||||..|:::.|:.||||:.||||||  .:.:||||.
Zfish    64 VLIPVQQYPKFNFVGKLLGPRGNSMKRLQEETGAKMSILGKGSMRDKGKEEELRKSGEAKYAHLS 128

  Fly   151 KNLFLEVSTVAIPAECHSRIAYALAEIRKYLIPDNNDEVSHEQLRELMEI----DPESAKNF--K 209
            .:|.:.:...|.|.|.:||:::||.||:|:|:||.|||:..||||||..:    ||...::.  :
Zfish   129 NDLHVLIEVFAPPGEAYSRMSHALEEIKKFLVPDYNDEIRQEQLRELSYLNGSDDPSRGRSSRGR 193

  Fly   210 GLNLEAYRSVRDSNGASKYINLIKRVAENPSKVADMEQV-------------------------- 248
            ||.|.:..|.|....|:.....::..|.....|:....|                          
Zfish   194 GLRLTSTASPRGRGSAAPPAPPVRGAAAPRGTVSSRTSVPTPARGVSAPRTRGTAGTPGYRAPSL 258

  Fly   249 --------DYDYDEHHMPPIHLPTGY--EYSIQ----------RPSKIVAKFKRPYPY 286
                    ||.||:          ||  ||..|          ..||.|:::   |.|
Zfish   259 QATHKTYEDYGYDD----------GYDGEYDDQSYESYDDNYSNQSKSVSEY---YEY 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4021NP_611610.2 KH-I_KHDRBS 80..179 CDD:411812 52/100 (52%)
khdrbs2XP_073776079.1 None

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