DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4021 and SF1

DIOPT Version :9

Sequence 1:NP_611610.2 Gene:CG4021 / 37484 FlyBaseID:FBgn0034659 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_524654.2 Gene:SF1 / 43912 FlyBaseID:FBgn0025571 Length:787 Species:Drosophila melanogaster


Alignment Length:355 Identity:70/355 - (19%)
Similarity:133/355 - (37%) Gaps:114/355 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ENPSEITEEQPTTTHEYQ---PRLNEIAQKFLADLDEERQRLSAEFPLCALLIDEARDRVYATGR 66
            :||.   |..|:....|.   .|||....::...|:|:|.:|..:.           ..|....:
  Fly   329 QNPE---ERSPSPEPIYSSDGKRLNTREFRYRKRLEEQRHQLIVKM-----------QTVNPEFK 379

  Fly    67 IPGKELYADVYRQKPMKIIQKVFVPVNQYPKFNFAGKILGPKGNSLRRLQEETQCKIALKGRSSM 131
            .|     || |:....::..||.:|..|:|..||.|.::||:||:|:.::::|..||.::|:.|:
  Fly   380 PP-----AD-YKPPVTRVSDKVLIPQEQHPDINFVGLLIGPRGNTLKAMEKDTGAKIIIRGKGSV 438

  Fly   132 RD----RNKEEEL--RSDPRYAHLQKNLFLEVSTVAIPAECHSRIAYALAEIRKYL-IPDNNDEV 189
            ::    |...:.|  ..:|.:|.:         |...|......:......||:.: :|:.::::
  Fly   439 KEGKVGRKDGQPLPGEDEPLHAFI---------TAPNPEAVRKAVDKIKDVIRQGIEVPEGHNDL 494

  Fly   190 SHEQLRELMEIDPESAKN---------------------------------FKGLNLEAYRSVRD 221
            ...|||||.:::....:|                                 ..|...:..|:.|.
  Fly   495 RRMQLRELAQLNGTLRENDIQRCTCGSTDHKSWQCPDKPIITNTIVCTSCGGTGHLTKDCRNKRP 559

  Fly   222 SNGA-------------SKYINLIKRVAENPSKVADMEQVDYDYDEHHMPP------IHLPTGYE 267
            .:|.             .:|::|:..:.|.|...:...:.|        ||      :|..:   
  Fly   560 GSGVPGMACEDSQAKIDEEYMSLMAELGEGPPPPSASAKTD--------PPASNGPQLHRAS--- 613

  Fly   268 YSIQRPSKIVAKFKRPYPYPTDMKPVREPP 297
            |||         |.:.   |:.|:.::.||
  Fly   614 YSI---------FDKK---PSQMQAIQSPP 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4021NP_611610.2 SF1_like-KH 86..202 CDD:239088 32/122 (26%)
SF1NP_524654.2 MSL5 253..512 CDD:227503 49/211 (23%)
SF1-HH 274..385 CDD:292892 16/75 (21%)
SF1_like-KH 392..510 CDD:239088 32/126 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460731
Domainoid 1 1.000 45 1.000 Domainoid score I3083
eggNOG 1 0.900 - - E1_COG5176
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11208
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.840

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