DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4021 and Psi

DIOPT Version :9

Sequence 1:NP_611610.2 Gene:CG4021 / 37484 FlyBaseID:FBgn0034659 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_995862.1 Gene:Psi / 36889 FlyBaseID:FBgn0014870 Length:797 Species:Drosophila melanogaster


Alignment Length:50 Identity:16/50 - (32%)
Similarity:28/50 - (56%) Gaps:8/50 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 KVFVPVNQYPKFNFAGKILGPKGNSLRRLQEETQCKIA-LKGRS-SMRDR 134
            :||||...      .|.::|..|:.:|::|.|..||:. ::|:: .|.||
  Fly   319 EVFVPKIA------VGVVIGKGGDMIRKIQTECGCKLQFIQGKNDEMGDR 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4021NP_611610.2 SF1_like-KH 86..202 CDD:239088 15/49 (31%)
PsiNP_995862.1 KH 120..185 CDD:197652
KH_1 214..276 CDD:278442
KH-I 317..380 CDD:238053 15/49 (31%)
KH_1 428..491 CDD:278442
DUF1897 591..619 CDD:286140
DUF1897 <653..680 CDD:286140
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D590738at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.010

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