DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4021 and qkia

DIOPT Version :10

Sequence 1:NP_611610.2 Gene:CG4021 / 37484 FlyBaseID:FBgn0034659 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_571299.1 Gene:qkia / 30471 ZFINID:ZDB-GENE-990415-230 Length:383 Species:Danio rerio


Alignment Length:349 Identity:89/349 - (25%)
Similarity:156/349 - (44%) Gaps:87/349 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 EEQPTTTHEYQPRLNEIAQKFLADLDEERQRLSAEFPLCAL------LIDEARDRVYATGRIPGK 70
            :|:|..:.:|           |..|..|::.:::...||.:      |:||..:||       .|
Zfish     9 KERPRPSPDY-----------LMQLLNEKKLMTSLPNLCGIFTHLERLLDEEINRV-------RK 55

  Fly    71 ELYAD----VYRQKPMK----------IIQKVFVPVNQYPKFNFAGKILGPKGNSLRRLQEETQC 121
            ::|.|    :..:.|::          :.:|:||||.:||.:||.|:||||:|.:.::|:.||.|
Zfish    56 DMYNDSVNGLVDKHPLELPEPVGPIVHLQEKLFVPVKEYPDYNFVGRILGPRGLTAKQLEAETGC 120

  Fly   122 KIALKGRSSMRDRNKEEELRSDPRYAHLQKNLFLEVSTVAIPAECHSRIAYALAEIRKYLIP--D 184
            ||.::|||||||:.|||:.|..|.:.||.::|.:.::..........::..|:.|::|.|:|  :
Zfish   121 KIMVRGRSSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDTQTRAEIKMRRAVEEVKKLLVPAAE 185

  Fly   185 NNDEVSHEQLRELMEIDPESAKNFKGLNLEAYRSVRDSNGASKYINLIKRVAENPSKVADMEQVD 249
            ..|.:...||.||..::    ..::..|::|.........|:......:.:|..|.:|       
Zfish   186 GEDNLKKMQLMELAILN----GTYRDTNIKAPTLAFSLAAAAAAAQGPRLIAAPPGQV------- 239

  Fly   250 YDYDEHHMPPIHL----PTGYE-YSIQRPSKIVAK------------------FKRPYPYPTDMK 291
                   :||..|    |.|.. .:|.||:::...                  :..||.||..:.
Zfish   240 -------LPPATLRPPTPAGTPIMNIIRPTQMATVLPNGTPTLVPPTPDAGIIYTTPYDYPYALA 297

  Fly   292 P--VREPPIK----FYKPNPGIGT 309
            |  :.|.||:    ..|...|:||
Zfish   298 PTSLLEYPIEHSGVLGKRAWGLGT 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4021NP_611610.2 KH-I_KHDRBS 80..179 CDD:411812 39/108 (36%)
qkiaNP_571299.1 STAR_dimer 11..64 CDD:435414 15/70 (21%)
KH-I_Hqk 82..184 CDD:411893 41/101 (41%)
PHA03291 <212..>306 CDD:223033 19/107 (18%)
Quaking_NLS 354..383 CDD:435421
Blue background indicates that the domain is not in the aligned region.

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