DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4021 and Qki

DIOPT Version :10

Sequence 1:NP_611610.2 Gene:CG4021 / 37484 FlyBaseID:FBgn0034659 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001152989.1 Gene:Qki / 19317 MGIID:97837 Length:341 Species:Mus musculus


Alignment Length:361 Identity:89/361 - (24%)
Similarity:145/361 - (40%) Gaps:108/361 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 TEEQPTTTHEYQPRLNEIAQKFLADLDEERQRLSAEFPLCAL------LIDEARDRVYATGRIPG 69
            |:|:|..|.:|           |..|..:::.:|:....|.:      |:||...||       .
Mouse     7 TKEKPKPTPDY-----------LMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRV-------R 53

  Fly    70 KELYADVYRQKPMK-----------IIQ---KVFVPVNQYPKFNFAGKILGPKGNSLRRLQEETQ 120
            |::|.|.......|           |:|   |::|||.:||.|||.|:||||:|.:.::|:.||.
Mouse    54 KDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETG 118

  Fly   121 CKIALKGRSSMRDRNKEEELRSDPRYAHLQKNLFLEVSTVAIPAECHSRIAYALAEIRKYLIP-- 183
            |||.::|:.||||:.|||:.|..|.:.||.::|.:.::..........::..|:.|::|.|:|  
Mouse   119 CKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAA 183

  Fly   184 DNNDEVSHEQLRELMEIDPESAKNFKGLNLEAYRSVRDSNGASKYI--------NLIKRVAENPS 240
            :..|.:...||.||..::               .:.||:|..|..:        ....|:...|:
Mouse   184 EGEDSLKKMQLMELAILN---------------GTYRDANIKSPALAFSLAATAQAAPRIITGPA 233

  Fly   241 KVADMEQVDYDYDEHHMPPIHL----------------------PTGYEY---SIQRPSKIVAKF 280
            .|              :||..|                      |.|..:   :|..|.......
Mouse   234 PV--------------LPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLI 284

  Fly   281 KRPYPYPTDMKP---VREPPIKFYKPNPGIGTYVMK 313
            ..||.||..:.|   :.|.||   :|:..:|....|
Mouse   285 YTPYEYPYTLAPATSILEYPI---EPSGVLGAVATK 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4021NP_611610.2 KH-I_KHDRBS 80..179 CDD:411812 39/112 (35%)
QkiNP_001152989.1 STAR_dimer 10..64 CDD:435414 15/71 (21%)
Qua1 domain, involved in homodimerization. /evidence=ECO:0000250|UniProtKB:Q17339 11..82 17/88 (19%)
KH-I_Hqk 81..183 CDD:411893 40/101 (40%)
Qua2 domain, involved in RNA binding. /evidence=ECO:0000250|UniProtKB:Q96PU8 182..213 9/45 (20%)
PHA03247 <211..314 CDD:223021 21/119 (18%)
SH3-binding 276..279 1/2 (50%)
Quaking_NLS 312..341 CDD:435421 2/6 (33%)
Nuclear localization signal. /evidence=ECO:0000269|PubMed:10506177, ECO:0000269|PubMed:29021242 324..330
Blue background indicates that the domain is not in the aligned region.

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