DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4021 and F54D1.1

DIOPT Version :10

Sequence 1:NP_611610.2 Gene:CG4021 / 37484 FlyBaseID:FBgn0034659 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_502114.1 Gene:F54D1.1 / 186227 WormBaseID:WBGene00010046 Length:278 Species:Caenorhabditis elegans


Alignment Length:168 Identity:42/168 - (25%)
Similarity:77/168 - (45%) Gaps:29/168 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 RIPGKELYADVYRQK---PMKIIQ-KVFVPV------NQYPKFNFAGKILGPKGNSLRRLQEETQ 120
            |.|.::| .|..|:|   ...::| ||::|.      .:..|.|:.|:||||.|.|.|.::.:..
 Worm   111 RSPDQDL-GDWSREKINDTQHVLQTKVYIPEPPVSIDGKKVKCNYIGRILGPSGMSARMIENQYD 174

  Fly   121 CKIALKGRSSMRDRNKEEELRSDPRYAHLQKNL-FLEVSTVAIPAECHSRIAYALAEIRKYLIPD 184
            ..:.::|..|:|::..:|.:|.  |..||::.| .|.::......:|...:..|..:|...|.| 
 Worm   175 VTLLIRGAGSVRNKAMDERVRK--RNEHLEEPLHVLLIARHNDKTKCEEILNKAAEKIESLLTP- 236

  Fly   185 NNDEVSHEQL--------------RELMEIDPESAKNF 208
            .:||...:||              :...::|.:|..|:
 Worm   237 IHDEYKMDQLVSYAKMNGTYQERPKRKSQLDEQSHSNY 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4021NP_611610.2 KH-I_KHDRBS 80..179 CDD:411812 28/109 (26%)
F54D1.1NP_502114.1 KH-I 132..236 CDD:469614 28/105 (27%)

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