DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4021 and Khdrbs2

DIOPT Version :10

Sequence 1:NP_611610.2 Gene:CG4021 / 37484 FlyBaseID:FBgn0034659 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_579852.1 Gene:Khdrbs2 / 170843 RGDID:621738 Length:349 Species:Rattus norvegicus


Alignment Length:206 Identity:86/206 - (41%)
Similarity:127/206 - (61%) Gaps:10/206 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 QKFLADLDEERQRLSAEFPLCALLIDEARDRVYAT-GRIPGKE-LYADVYRQKPMKIIQKVFVPV 92
            :|:|.:|..|:..|...|...:.|:.|..::...: ||...:| .|.||...|.:|:.::|.:||
  Rat     4 EKYLPELMAEKDSLDPSFVHASRLLAEEIEKFQGSDGRKEDEEKKYLDVISNKNIKLSERVLIPV 68

  Fly    93 NQYPKFNFAGKILGPKGNSLRRLQEETQCKIALKGRSSMRDRNKEEELR--SDPRYAHLQKNLFL 155
            .|||||||.||:|||:||||:||||||..|:::.|:.||||:.||||||  .:.:||||...|.:
  Rat    69 KQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEAKYAHLSDELHV 133

  Fly   156 EVSTVAIPAECHSRIAYALAEIRKYLIPDNNDEVSHEQLRELMEID--PESAK----NFKGLNLE 214
            .:...|.|.|.:||:::||.||:|:|:||.|||:..||||||..::  .||.:    ..:|:.:.
  Rat   134 LIEVFAPPGEAYSRMSHALEEIKKFLVPDYNDEIRQEQLRELSYLNGSEESGRGRGIRGRGIRIT 198

  Fly   215 AYRSVRDSNGA 225
            .....|...||
  Rat   199 PTAPSRGRGGA 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4021NP_611610.2 KH-I_KHDRBS 80..179 CDD:411812 53/100 (53%)
Khdrbs2NP_579852.1 Qua1 5..57 CDD:465079 14/51 (27%)
KH-I_KHDRBS2 54..171 CDD:411897 60/116 (52%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 181..263 6/29 (21%)
Sam68-YY 271..321 CDD:465182
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 320..349
Blue background indicates that the domain is not in the aligned region.

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