DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4021 and Khdrbs3

DIOPT Version :10

Sequence 1:NP_611610.2 Gene:CG4021 / 37484 FlyBaseID:FBgn0034659 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_034288.2 Gene:Khdrbs3 / 13992 MGIID:1313312 Length:346 Species:Mus musculus


Alignment Length:170 Identity:78/170 - (45%)
Similarity:112/170 - (65%) Gaps:3/170 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 QKFLADLDEERQRLSAEFPLCALLIDEARDRVYATGRIPGKELYADVYRQKPMKIIQKVFVPVNQ 94
            :|:|.:|..|:..|...|.....|::...:: :..|....:|.|.||...|.||:.|||.:||.|
Mouse     3 EKYLPELMAEKDSLDPSFTHALRLVNREIEK-FQKGEGKEEEKYIDVVINKNMKLGQKVLIPVKQ 66

  Fly    95 YPKFNFAGKILGPKGNSLRRLQEETQCKIALKGRSSMRDRNKEEELR--SDPRYAHLQKNLFLEV 157
            :|||||.||:|||:||||:||||||..|:::.|:.||||:.||||||  .:.:|.||..:|.:.:
Mouse    67 FPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKYFHLNDDLHVLI 131

  Fly   158 STVAIPAECHSRIAYALAEIRKYLIPDNNDEVSHEQLREL 197
            ...|.|||.::|:.:||.||:|:||||.|||:...||:||
Mouse   132 EVFAPPAEAYARMGHALEEIKKFLIPDYNDEIRQAQLQEL 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4021NP_611610.2 KH-I_KHDRBS 80..179 CDD:411812 54/100 (54%)
Khdrbs3NP_034288.2 Involved in homodimerization. /evidence=ECO:0000250|UniProtKB:O75525 1..160 71/157 (45%)
Qua1 4..53 CDD:465079 12/49 (24%)
KH-I_KHDRBS3 48..160 CDD:411898 60/111 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 212..266
Sam68-YY 266..320 CDD:465182
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 317..346
Blue background indicates that the domain is not in the aligned region.

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