DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Grx1t and grxA

DIOPT Version :9

Sequence 1:NP_611609.1 Gene:Grx1t / 37483 FlyBaseID:FBgn0034658 Length:116 Species:Drosophila melanogaster
Sequence 2:NP_415370.1 Gene:grxA / 945479 ECOCYCID:EG10417 Length:85 Species:Escherichia coli


Alignment Length:83 Identity:25/83 - (30%)
Similarity:39/83 - (46%) Gaps:24/83 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 KVVIFSKSYCPYCSMAKEQFRKINVKATVIELDQRDD--------------GNEIQAVLGEMTGS 83
            :.|||.:|.||||..||:...|::        ::|||              ..::|...|:..  
E. coli     2 QTVIFGRSGCPYCVRAKDLAEKLS--------NERDDFQYQYVDIRAEGITKEDLQQKAGKPV-- 56

  Fly    84 RTVPRCFIDGKFVGGGTD 101
            .|||:.|:|.:.:||.||
E. coli    57 ETVPQIFVDQQHIGGYTD 74

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Grx1tNP_611609.1 GRX_GRXh_1_2_like 33..113 CDD:239511 25/83 (30%)
grxANP_415370.1 grxA 1..84 CDD:183036 25/83 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0695
Hieranoid 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000858
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100315
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
43.710

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