DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Grx1t and Glrx

DIOPT Version :9

Sequence 1:NP_611609.1 Gene:Grx1t / 37483 FlyBaseID:FBgn0034658 Length:116 Species:Drosophila melanogaster
Sequence 2:NP_001347080.1 Gene:Glrx / 93692 MGIID:2135625 Length:107 Species:Mus musculus


Alignment Length:92 Identity:32/92 - (34%)
Similarity:51/92 - (55%) Gaps:3/92 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 QFVRDTISGNKVVIFSKSYCPYCSMAKEQFRKINVKATVIE---LDQRDDGNEIQAVLGEMTGSR 84
            :||...|...|||:|.|..||||...:|...::..|..::|   :...::.:.||..|.::||:|
Mouse     4 EFVNCKIQSGKVVVFIKPTCPYCRKTQEILSQLPFKQGLLEFVDITATNNTSAIQDYLQQLTGAR 68

  Fly    85 TVPRCFIDGKFVGGGTDVKRLYEQGIL 111
            ||||.||....:||.:|:..:.:.|.|
Mouse    69 TVPRVFIGKDCIGGCSDLISMQQTGEL 95

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Grx1tNP_611609.1 GRX_GRXh_1_2_like 33..113 CDD:239511 29/82 (35%)
GlrxNP_001347080.1 GRX_euk 15..99 CDD:274016 28/81 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0695
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1535999at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100315
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R496
SonicParanoid 1 1.000 - - X228
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.710

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