DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grx1t and AT3G28850

DIOPT Version :9

Sequence 1:NP_611609.1 Gene:Grx1t / 37483 FlyBaseID:FBgn0034658 Length:116 Species:Drosophila melanogaster
Sequence 2:NP_189527.1 Gene:AT3G28850 / 822517 AraportID:AT3G28850 Length:428 Species:Arabidopsis thaliana


Alignment Length:102 Identity:25/102 - (24%)
Similarity:52/102 - (50%) Gaps:22/102 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 TISGNKVVIF-------SKSYCPYCSMAKEQFRKINVKATVIELDQRDDG------NEIQAVLGE 79
            ::...:|:::       .|:|...|.:      ::.:|:..|.:|:||..      :|::.:|||
plant   247 SVGKERVILYFTSLRGIRKTYEESCDV------RVILKSLGIRVDERDVSMHSGFKDELKELLGE 305

  Fly    80 MTGSR---TVPRCFIDGKFVGGGTDVKRLYEQGILQK 113
            .....   |:||.|:..|::||..::::|.|.|.|:|
plant   306 KFNKGVGITLPRVFLGRKYIGGAEEIRKLNEDGKLEK 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Grx1tNP_611609.1 GRX_GRXh_1_2_like 33..113 CDD:239511 24/95 (25%)
AT3G28850NP_189527.1 GRX_GRX_like 252..423 CDD:239329 25/97 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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