DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grx1t and glrx

DIOPT Version :9

Sequence 1:NP_611609.1 Gene:Grx1t / 37483 FlyBaseID:FBgn0034658 Length:116 Species:Drosophila melanogaster
Sequence 2:NP_001016597.1 Gene:glrx / 549351 XenbaseID:XB-GENE-971624 Length:107 Species:Xenopus tropicalis


Alignment Length:96 Identity:33/96 - (34%)
Similarity:50/96 - (52%) Gaps:3/96 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 FVRDTISGNKVVIFSKSYCPYCSMAKEQFRKINVK---ATVIELDQRDDGNEIQAVLGEMTGSRT 85
            ||:..:..:||.:|.|..||:|..||....|.|.|   ..:|::.:.|..:.:|....:.||..|
 Frog     5 FVQSKLKPSKVTMFEKPTCPFCVRAKGVLTKYNFKDGHLEIIDICKLDFMSSLQQYFKQSTGEST 69

  Fly    86 VPRCFIDGKFVGGGTDVKRLYEQGILQKYFQ 116
            |||.:|..|.:||.:|:..|...|.|:|..|
 Frog    70 VPRIYIGEKCIGGCSDLVPLENSGELEKALQ 100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Grx1tNP_611609.1 GRX_GRXh_1_2_like 33..113 CDD:239511 29/82 (35%)
glrxNP_001016597.1 GRX_euk 15..99 CDD:274016 29/83 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1535999at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R496
SonicParanoid 1 1.000 - - X228
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.950

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