DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grx1t and AT2G47870

DIOPT Version :9

Sequence 1:NP_611609.1 Gene:Grx1t / 37483 FlyBaseID:FBgn0034658 Length:116 Species:Drosophila melanogaster
Sequence 2:NP_001318444.1 Gene:AT2G47870 / 28718362 AraportID:AT2G47870 Length:103 Species:Arabidopsis thaliana


Alignment Length:90 Identity:30/90 - (33%)
Similarity:45/90 - (50%) Gaps:1/90 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 VRDTISGNKVVIFSKSYCPYCSMAKEQFRKINVKATVIELDQRDDGNEIQAVLGEMTGSR-TVPR 88
            |||..|....|||:||.|..|...|..|.::.....:.|||:...|.:::..|..:.||. .||.
plant     4 VRDLASEKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDPQGPDMERALFRVFGSNPAVPA 68

  Fly    89 CFIDGKFVGGGTDVKRLYEQGILQK 113
            .|:.|::||...||...:..|.|::
plant    69 VFVGGRYVGSAKDVISFHVDGSLKQ 93

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Grx1tNP_611609.1 GRX_GRXh_1_2_like 33..113 CDD:239511 26/80 (33%)
AT2G47870NP_001318444.1 GlrX-like_plant 4..103 CDD:274023 30/90 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0695
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1535999at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.780

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