DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grx1t and sh3bgrl3

DIOPT Version :9

Sequence 1:NP_611609.1 Gene:Grx1t / 37483 FlyBaseID:FBgn0034658 Length:116 Species:Drosophila melanogaster
Sequence 2:NP_001096514.1 Gene:sh3bgrl3 / 100125146 XenbaseID:XB-GENE-965976 Length:93 Species:Xenopus tropicalis


Alignment Length:73 Identity:16/73 - (21%)
Similarity:28/73 - (38%) Gaps:2/73 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 SMAKEQFRKINVKATVIELDQRDDGNEIQAVLGEMTGSRTV--PRCFIDGKFVGGGTDVKRLYEQ 108
            |...|..|.::.|....|.......|.|:..:.:|.|:...  |:.|.|.::.|.........|.
 Frog    18 SKQSEITRILDSKCIKYETVDISADNNIRTEMRQMCGNPNAFPPQIFNDDQYCGDYEQFAAAVED 82

  Fly   109 GILQKYFQ 116
            .||.::.:
 Frog    83 EILSQFLK 90

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Grx1tNP_611609.1 GRX_GRXh_1_2_like 33..113 CDD:239511 16/68 (24%)
sh3bgrl3NP_001096514.1 GRX_SH3BGR 2..91 CDD:239328 16/73 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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