DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LBR and ERG24

DIOPT Version :9

Sequence 1:NP_726114.1 Gene:LBR / 37482 FlyBaseID:FBgn0034657 Length:741 Species:Drosophila melanogaster
Sequence 2:NP_014119.1 Gene:ERG24 / 855441 SGDID:S000005224 Length:438 Species:Saccharomyces cerevisiae


Alignment Length:479 Identity:111/479 - (23%)
Similarity:200/479 - (41%) Gaps:89/479 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   305 PR----EFGGWLGAFLFLLLLPTAVYYLTWSCTARNACQFKHLNLGILLDVNYLTRQVFQ----- 360
            ||    ||||.:||....:.||...                 :.|..::..:|..:..||     
Yeast     7 PRTTEFEFGGLIGALGISIGLPVFT-----------------IILNQMIRPDYFIKGFFQNFDIV 54

  Fly   361 ---------------PRVVGAFAAYQVVVFLLVALLPGR---RVHL---TRETYKFNCLAVSLTL 404
                           ..:...:..:..::.:|..:||||   .|.|   ::.:||.|.:|:|.||
Yeast    55 ELWNGIKPLRYYLGNRELWTVYCLWYGILAVLDVILPGRVMKGVQLRDGSKLSYKINGIAMSTTL 119

  Fly   405 LIASGVAEYL---KYPVVTFVLRHYLRFCIFGLVGAFVAAAWSYW-----LVDTAKYNVLRQTLT 461
            ::...:...|   :.|.:.::..:::..||..::.:|..|.:.|.     |:.....|..|:.:.
Yeast   120 VLVLAIRWKLTDGQLPELQYLYENHVSLCIISILFSFFLATYCYVASFIPLIFKKNGNGKREKIL 184

  Fly   462 NDYGRTGSFVVDFALGRQLNPKWLGRVDWKQF-QYRLS-LVTTLIYATCYIYQTLVWPQKPQLGE 524
            ...|.:|:.:.|:.:||:|||: ||.:|.|.| :.|.. |:..||..:|..:..|          
Yeast   185 ALGGNSGNIIYDWFIGRELNPR-LGPLDIKMFSELRPGMLLWLLINLSCLHHHYL---------- 238

  Fly   525 QEGYLYQAKYYWNNVNYDPATLFSASCLLFYVLDAIIFEHHLSSSFELQHEGYGCLLLL-RYAAT 588
            :.|.:..|...   ||:...         ||:.|.::.|..:.:..::..:|:|.:|.. ..:..
Yeast   239 KTGKINDALVL---VNFLQG---------FYIFDGVLNEEGVLTMMDITTDGFGFMLAFGDLSLV 291

  Fly   589 PYLLTAVTKYFYEQRVPISCWYAPLAVAALLSLGLLVKRFSCAYKYKYRLNSQSPIFANIETIHT 653
            |:..:...:|.....|.:. |...:.:.|::.||..:  |..|.|.|.......  ..|:::|.|
Yeast   292 PFTYSLQARYLSVSPVELG-WVKVVGILAIMFLGFHI--FHSANKQKSEFRQGK--LENLKSIQT 351

  Fly   654 YQGSRLLLSGMWGWVRQPNYLGDIVALLALAAPMALRPAWPPVLGLSL-IILLLLHRATRANARN 717
            .:|::||..|.|...:..||.||  .|::|:..:|.....|.....|| ...|||||..|...:.
Yeast   352 KRGTKLLCDGWWAKSQHINYFGD--WLISLSWCLATWFQTPLTYYYSLYFATLLLHRQQRDEHKC 414

  Fly   718 QARYHSSWQRYSTQVRSYILPRVY 741
            :.:|..:|:.|..:|...|:|.||
Yeast   415 RLKYGENWEEYERKVPYKIIPYVY 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LBRNP_726114.1 PEMT 304..741 CDD:304400 109/477 (23%)
ERG24NP_014119.1 ERG4_ERG24 8..438 CDD:250456 108/476 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1435
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2455
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53801
OrthoFinder 1 1.000 - - FOG0000851
OrthoInspector 1 1.000 - - oto100283
orthoMCL 1 0.900 - - OOG6_102075
Panther 1 1.100 - - O PTHR21257
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3179
SonicParanoid 1 1.000 - - X598
TreeFam 1 0.960 - -
1211.810

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