DRSC/TRiP Functional Genomics Resources

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Protein Alignment LBR and Tm7sf2

DIOPT Version :9

Sequence 1:NP_726114.1 Gene:LBR / 37482 FlyBaseID:FBgn0034657 Length:741 Species:Drosophila melanogaster
Sequence 2:NP_082730.2 Gene:Tm7sf2 / 73166 MGIID:1920416 Length:418 Species:Mus musculus


Alignment Length:459 Identity:126/459 - (27%)
Similarity:199/459 - (43%) Gaps:68/459 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   303 KAPREFGGWLGAFLFLLLLPTAVYYLTWSCTARNACQFKHLNLGILLDVNYLTRQVFQPRVVGAF 367
            :||.||||.||....|:|||..:::|..:..:..|              ..|....:.|.:...:
Mouse     8 QAPLEFGGPLGVAALLILLPATMFHLLLAARSGPA--------------RLLALPAYLPGLEELW 58

  Fly   368 AAYQVVVFLL-------VALLPGRRV-------HLTRETYKFNCL-AVSLT-LLIASGVAEYLKY 416
            :.:.:::..:       :.|||.|:|       ..:|..|..|.. |:.|| ||:..||:..|..
Mouse    59 SPWALLLLFIWLGLQVALYLLPARKVAEGLELKDKSRLRYPINGFQALVLTALLMGLGVSVGLPL 123

  Fly   417 PVVTFVLRHYLRFCIFGLVGAFVAAAWSYWLVDTAKYNVLRQTLTNDYGRTGSFVVDFALGRQLN 481
            ..:..:|        ..|..|....::.:.|:..||..|...:.....|.:|:.:.||.|||:||
Mouse   124 GALPGML--------LPLAFATTLTSFIFSLLLYAKALVAPASALAPGGNSGNSMYDFFLGRELN 180

  Fly   482 PKWLGRVDWKQF-QYRLSLVTTLIYATCYIYQTLVWPQKPQLGEQEGYLYQAKYYWNNVNYDPAT 545
            |: ||..|:|.| :.|..|:..:......:.|.......|.|         |.:..|...     
Mouse   181 PR-LGSFDFKYFCELRPGLIGWVFINLALLMQEAELRGSPSL---------AMWLVNGFQ----- 230

  Fly   546 LFSASCLLFYVLDAIIFEHHLSSSFELQHEGYGCLLL---LRYAATPYLLTAVTKYFYEQRVPIS 607
                   |.||.||:.:|..:.::.::.|:|:|.:|:   |.:....|.|.|....::.|  |:.
Mouse   231 -------LLYVGDALWYEESVLTTMDIIHDGFGFMLVFGDLAWVPFTYSLQAQFLLYHPQ--PLG 286

  Fly   608 CWYAPLAVAALLSLGLLVKRFSCAYKYKYRLNSQSPIFANIETIHTYQGSRLLLSGMWGWVRQPN 672
            ...| |.:..|..:|..:.|.:.:.|..:|.|...|..|.:|||.|..|.:||:||.||.||.||
Mouse   287 LPMA-LLICLLKVIGYYIFRGANSQKNTFRKNPSDPSVAGLETIPTATGRQLLVSGWWGMVRHPN 350

  Fly   673 YLGDIVALLALAAPMALRPAWPPVLGLSLIILLLLHRATRANARNQARYHSSWQRYSTQVRSYIL 737
            ||||::..||.:.|..|....|....| ....||:||..|...:...:|..:||.|..:|...|:
Mouse   351 YLGDLIMALAWSLPCGLSHLLPYFYVL-YFTALLVHREARDEQQCLQKYGRAWQEYCKRVPYRII 414

  Fly   738 PRVY 741
            |.||
Mouse   415 PYVY 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LBRNP_726114.1 PEMT 304..741 CDD:304400 124/456 (27%)
Tm7sf2NP_082730.2 PEMT 8..418 CDD:389781 124/457 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 99 1.000 Domainoid score I7060
eggNOG 1 0.900 - - E1_KOG1435
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 136 1.000 Inparanoid score I4536
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53801
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000851
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_102075
Panther 1 1.100 - - LDO PTHR21257
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3179
SonicParanoid 1 1.000 - - X598
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.860

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