DRSC/TRiP Functional Genomics Resources

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Protein Alignment LBR and dhcr7

DIOPT Version :9

Sequence 1:NP_726114.1 Gene:LBR / 37482 FlyBaseID:FBgn0034657 Length:741 Species:Drosophila melanogaster
Sequence 2:XP_031755821.1 Gene:dhcr7 / 394844 XenbaseID:XB-GENE-920362 Length:487 Species:Xenopus tropicalis


Alignment Length:542 Identity:122/542 - (22%)
Similarity:183/542 - (33%) Gaps:202/542 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   309 GGW----------LGAFLFLL-LLPTAVYYLTWSCTARNACQFKHLNLGILLDVNYLTRQVFQ-- 360
            |.|          |.|.|||| ..|..|||...||.     |::......:||:.:...|:..  
 Frog    39 GQWGRAWEVDYFSLAAVLFLLAFAPLIVYYFVMSCD-----QYQCALTAPVLDLYWGKAQLSDIW 98

  Fly   361 ----------PRVVGAFAAYQVVVFLLV-----ALLPGRR------------------------- 385
                      .::...:.::||.:::||     ..:||..                         
 Frog    99 DKTPALTWGAAKIYIVWVSFQVFLYMLVPDILHKFVPGYEGGVQEGARTPAGLINKYQVNGLQAW 163

  Fly   386 --VHLT--RETYKFNCLAVSLTLLIASGV-----AEYLKYPVVTFVLRHYLRFCIFGLVGAFVAA 441
              .||.  ...|.|:..  |.|::|.:.|     |..|.|.|.||.|   |:...|         
 Frog   164 TITHLLWFANAYHFHWF--SPTIIIDNWVPLLWCANLLGYSVATFAL---LKAYFF--------- 214

  Fly   442 AWSYWLVDTAKYNVLRQTLTNDYGRTGSFVVDFALGRQLNP---KWLGRVDWKQ-FQYRLSLVT- 501
                            .|..:|...||:|..|:.:|.:.||   ||.   |:|. |..|..:|. 
 Frog   215 ----------------PTNAHDCKFTGNFFYDYMMGIEFNPRIGKWF---DFKLFFNGRPGIVAW 260

  Fly   502 TLIYATCYIYQTLVWPQKPQLGEQEGY---------------LYQAKYYWNNVNYDPATLFSASC 551
            |||        .|.:..|    :||.|               :|...::||              
 Frog   261 TLI--------NLSYAAK----QQELYGQVTNSMILVNVLQAIYVVDFFWN-------------- 299

  Fly   552 LLFYVLDAIIFEHHLSSSFELQHEGYG-------CLLLLRYAATPYLLTAVTKYFYEQRVPISCW 609
                       |.....:.::.|:.:|       |:.|      |||.|....|.....|.:|  
 Frog   300 -----------ESWYLKTIDICHDHFGWYLGWGDCVWL------PYLYTLQGLYLVYNPVELS-- 345

  Fly   610 YAPLAVAALLSLGLLVKRFSCAYKYKYRL-NSQSPIF--------------ANIETIHTYQG--- 656
             ...||..|| |||:      .| |.:|: |.|..:|              .:||..:|...   
 Frog   346 -TATAVGVLL-LGLI------GY-YIFRMTNHQKDLFRRTNGNCKIWGKKPKSIECSYTSADGKR 401

  Fly   657 --SRLLLSGMWGWVRQPNYLGDIVALLALAAPMALRPAWPPVLGLSLIILLLLHRATRANARNQA 719
              |:|::||.||..|..||.||::..||........... |....:.:.:||:||..|...|..:
 Frog   402 HYSKLMISGFWGVARHLNYTGDLMGSLAYCLACGFDHLL-PYFYFTYMTILLVHRCIRDEHRCSS 465

  Fly   720 RYHSSWQRYSTQVRSYILPRVY 741
            :|...|:.|:..|...:||.::
 Frog   466 KYGKDWKLYTDAVPYRLLPGLF 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LBRNP_726114.1 PEMT 304..741 CDD:304400 122/540 (23%)
dhcr7XP_031755821.1 PEMT 111..487 CDD:419701 104/463 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 100 1.000 Domainoid score I6894
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 147 1.000 Inparanoid score I4308
OMA 1 1.010 - - QHG53801
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000851
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3179
SonicParanoid 1 1.000 - - X598
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.000

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