DRSC/TRiP Functional Genomics Resources

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Protein Alignment LBR and tm7sf2

DIOPT Version :9

Sequence 1:NP_726114.1 Gene:LBR / 37482 FlyBaseID:FBgn0034657 Length:741 Species:Drosophila melanogaster
Sequence 2:XP_031755653.1 Gene:tm7sf2 / 100127815 XenbaseID:XB-GENE-1005373 Length:467 Species:Xenopus tropicalis


Alignment Length:522 Identity:143/522 - (27%)
Similarity:233/522 - (44%) Gaps:91/522 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 SRYSRSVSRSVYDDEKSSKRSYSTGE------EDIDEEDELEEDQFRSFNVTRKSATPAEISCRQ 301
            |.:.:|.|..|.  |..|:|..:.|.      |::...|::            |::..:|:    
 Frog    14 SFWKKSCSTCVL--EWGSRRCRNHGRLSNYLVEELKMADKI------------KTSRTSEL---- 60

  Fly   302 LKAPREFGGWLGAFLFLLLLPTAVYYLTWSCTARNACQFKHLNLGILLDVNYLTRQVFQPRVVGA 366
                 ||||.|||.|.|.::|..|.||..:|:..:|...:.......||..:   ..|...::.:
 Frog    61 -----EFGGPLGALLLLFVMPGTVLYLLVTCSTEDASVLRVPGPWPALDTLW---DPFAVILLLS 117

  Fly   367 FAAYQVVVFLLVALLPGRRVHL---TRETYKFNCL-AVSLTLLIASGVAEYLKYPVVTFVLRHYL 427
            :.:.|.|:::|........:.|   ||..|:.|.| |:.:|.|||:| |....:| :::|..|:|
 Frog   118 WVSLQAVLYMLPIGKVTEGITLRDNTRLKYRINALQAMMVTALIAAG-AVMFGFP-LSYVYDHFL 180

  Fly   428 RFCIFGLVGAFVAAAWSYWLVDTAKYNVLRQTLTNDYGRTGSFVVDFALGRQLNPKWLGRVDWKQ 492
            :..:   ..||:|...|.:|.  ||.....|:.....|.:|:.:.||.:|.:|||: :|..|.|.
 Frog   181 QMAV---GAAFIALILSIFLY--AKSLAAPQSALAPGGNSGNPLYDFFIGHELNPR-IGSFDLKY 239

  Fly   493 F-QYRLSLVTTLIYATCYIYQTLVWPQKPQLGEQEGYLYQAKYYWNNVNYDPATLFSASCLLFYV 556
            | :.|..|:...:...|::.:.:.....|.|.....:.:||                     .||
 Frog   240 FCELRPGLIGWCLINLCFLMKDIELRGSPSLSMILVFGFQA---------------------LYV 283

  Fly   557 LDAIIFEHHLSSSFELQHEGYGCLLL---LRYAATPYLLTAVTKYFYEQRVPISCWYAPLAVAAL 618
            :||:..|..:.::.::.|:|:|.:|.   |.:....|.|..   ||..:.......||.:.:..|
 Frog   284 VDAMKHEEAILTTMDIVHDGFGFMLAFGDLCWVPFTYSLQG---YFLVRHPQELSTYAAVGIILL 345

  Fly   619 LSLGLLVKRFSCAYKYKYRLNSQSPIFANIETIHTYQGSRLLLSGMWGWVRQPNYLGDIVALLAL 683
            .::|.::.|.|.:.|..:|.|...|....:|||.|..|.|||:||.||.||.||||||::     
 Frog   346 NAVGYIIFRGSNSQKNAFRRNPADPKVVGLETIPTATGKRLLVSGWWGLVRHPNYLGDLI----- 405

  Fly   684 AAPMALRPAWPPVLGLSLII---------LLLLHRATRANARNQARYHSSWQRYSTQVRSYILPR 739
               |||  ||....|||.|:         :||:||..|...:...:|..:||.|..:|...|.|.
 Frog   406 ---MAL--AWSLPCGLSNILPYFYVIYFTVLLVHREARDEHQCMKKYGVAWQEYCRRVPYRIFPY 465

  Fly   740 VY 741
            :|
 Frog   466 IY 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LBRNP_726114.1 PEMT 304..741 CDD:304400 130/453 (29%)
tm7sf2XP_031755653.1 PEMT 59..467 CDD:419701 131/461 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 100 1.000 Domainoid score I6894
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 147 1.000 Inparanoid score I4308
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000851
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR21257
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X598
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.150

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