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Protein Alignment HmgD and HMGB2
DIOPT Version :9
Sequence 1: | NP_001163244.1 |
Gene: | HmgD / 37481 |
FlyBaseID: | FBgn0004362 |
Length: | 112 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_564123.1 |
Gene: | HMGB2 / 838658 |
AraportID: | AT1G20693 |
Length: | 144 |
Species: | Arabidopsis thaliana |
Alignment Length: | 113 |
Identity: | 36/113 - (31%) |
Similarity: | 63/113 - (55%) |
Gaps: | 17/113 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 DKPKRPLSAYMLWLNSARESIKRENPGIK-VTEVAKRGGELWRAMKD--KSEWEAKAAKAKDDYD 64
:|||||.||:.:::...||:.|:|||..| |..|.|..|:.|:::.| |:.:.|||.|.|.:|:
plant 36 NKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYE 100
Fly 65 RAVKEFEANGGSSAANGGGAKKRAKPAKKVAKKSKKEESDEDDDDESE 112
:.:|.: .|:.:...|..::|.|..|:.:|:|::|
plant 101 KNIKAY--------------NKKLEEGPKEDEESDKSVSEVNDEDDAE 134
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
1 |
1.000 |
57 |
1.000 |
Domainoid score |
I3986 |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5648 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
69 |
1.000 |
Inparanoid score |
I2470 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1641977at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000133 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm3355 |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_100324 |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
8 | 7.770 |
|
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