Protein Alignment HmgD and HMGB5

DIOPT Version :9

• Sequence 1: NP_001163244.1
• Gene: HmgD / 37481
• FlyBaseID: FBgn0004362
• Length: 112
• Species: Drosophila melanogaster
• Sequence 2: NP_001329802.1
• Gene: HMGB5 / 829709
• AraportID: AT4G35570
• Length: 125
• Species: Arabidopsis thaliana
• Alignment Length: 95
• Identity: 25/95 - (26%)
• Similarity: 50/95 - (52%)
• Gaps: 9/95 - (9%)

  Fly     3 DKPKRPLSAYMLWLNSARESIKRENPGIK-VTEVAKRGGELWRAM--KDKSEWEAKAAKAKDDYD 64
            ::||:|.|.:.::|:..|:.....||..| |..|.:..|:.|:.|  ::::.:.||:...|.:|.
plant    32 NRPKKPPSPFFVFLDDFRKEFNLANPDNKSVGNVGRAAGKKWKTMTEEERAPFVAKSQSKKTEYA 96

  Fly    65 RAVKEFE---ANGGSSAANGGGAKKRAKPA 91
            ..::::.   |||..:.   |..:|:.|.|
plant    97 VTMQQYNMELANGNKTT---GDDEKQEKAA 123

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HmgD	NP_001163244.1	HMGB-UBF_HMG-box	5..68	CDD:238686	18/65 (28%)
HMGB5	NP_001329802.1	HMGB-UBF_HMG-box	34..100	CDD:238686	18/65 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	57	1.000	Domainoid score	I3986
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	69	1.000	Inparanoid score	I2470
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	1	1.000	-	-		FOG0000133
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_100324
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	7	6.770