Protein Alignment HmgD and 3xHMG-box1

DIOPT Version :9

• Sequence 1: NP_001163244.1
• Gene: HmgD / 37481
• FlyBaseID: FBgn0004362
• Length: 112
• Species: Drosophila melanogaster
• Sequence 2: NP_192846.1
• Gene: 3xHMG-box1 / 826709
• AraportID: AT4G11080
• Length: 446
• Species: Arabidopsis thaliana
• Alignment Length: 101
• Identity: 33/101 - (32%)
• Similarity: 55/101 - (54%)
• Gaps: 19/101 - (18%)

  Fly     4 KPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKD--KSEWEAKAAKAKDDYDRA 66
            |||:|:|||:::.|..|.::|.||.  .|.||||..||.|:.:.:  |:.::..|.|.|:.|
plant   245 KPKQPISAYLIYANERRAALKGENK--SVIEVAKMAGEEWKNLSEEKKAPYDQMAKKNKEIY--- 304

  Fly    67 VKEFEANGGSSAANGGGAKKRAKPAKKVAKKSKKEE 102
            ::|.|            ..||.|..:.:::|.::||
plant   305 LQEME------------GYKRTKEEEAMSQKKEEEE 328

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HmgD	NP_001163244.1	HMGB-UBF_HMG-box	5..68	CDD:238686	24/64 (38%)
3xHMG-box1	NP_192846.1	HMGB-UBF_HMG-box	130..193	CDD:238686
		HMGB-UBF_HMG-box	246..309	CDD:238686	25/67 (37%)
		HMGB-UBF_HMG-box	372..437	CDD:238686

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	1	1.000	-	-		FOG0000133
OrthoInspector	1	1.000	-	-		otm3355
orthoMCL	1	0.900	-	-		OOG6_100324
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	6	5.720