Protein Alignment HmgD and HMGB1

DIOPT Version :9

• Sequence 1: NP_001163244.1
• Gene: HmgD / 37481
• FlyBaseID: FBgn0004362
• Length: 112
• Species: Drosophila melanogaster
• Sequence 2: NP_974413.1
• Gene: HMGB1 / 824351
• AraportID: AT3G51880
• Length: 185
• Species: Arabidopsis thaliana
• Alignment Length: 138
• Identity: 44/138 - (31%)
• Similarity: 70/138 - (50%)
• Gaps: 32/138 - (23%)

  Fly     3 DKPKRPLSAYMLWLNSARESIKRENPGIK-VTEVAKRGGELWRAMK--DKSEWEAKAAKAKDDYD 64
            :||||..||:.::|...|.:.|:|||.:| |:.|.|.||:.|::|.  :|:.:|.||||.|.:|:
plant    51 NKPKRAPSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYE 115

  Fly    65 RAVKEFEAN--GGSSAANGGGAKKRA-----------------------KPAKKVAKKSKKEESD 104
            :.:..:..|  .||..:.    |.|:                       |.|....::.::||.|
plant   116 KQMDAYNKNLEEGSDESE----KSRSEINDEDEASGEVTIPLSNEELLEKEAAGDDEEEEEEEDD 176

  Fly   105 EDDDDESE 112
            :|||||.|
plant   177 DDDDDEEE 184

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HmgD	NP_001163244.1	HMGB-UBF_HMG-box	5..68	CDD:238686	27/65 (42%)
HMGB1	NP_974413.1	HMG_box	53..121	CDD:278906	27/67 (40%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	57	1.000	Domainoid score	I3986
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	69	1.000	Inparanoid score	I2470
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	1	1.000	-	-		FOG0000133
OrthoInspector	1	1.000	-	-		otm3355
orthoMCL	1	0.900	-	-		OOG6_100324
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	9	8.770