Protein Alignment HmgD and AT2G34450

DIOPT Version :10

• Sequence 1: NP_726109.1
• Gene: HmgD / 37481
• FlyBaseID: FBgn0004362
• Length: 112
• Species: Drosophila melanogaster
• Sequence 2: NP_001031480.1
• Gene: AT2G34450 / 818008
• AraportID: AT2G34450
• Length: 152
• Species: Arabidopsis thaliana
• Alignment Length: 112
• Identity: 27/112 - (24%)
• Similarity: 49/112 - (43%)
• Gaps: 26/112 - (23%)

  Fly     5 PKRPLSAYMLWLNSARESIKRENPGIKVTE--VAKRGGELWRAM--KDKSEWEAKAAKAKDDYDR 65
            ||:|.:|:..:|:..|:..:.|||.:|...  :.|..||.|:.|  ::|.::...|.:.::::.|
plant    63 PKKPATAFFFFLDDFRKQYQEENPDVKSMREVIGKTCGEKWKTMTYEEKVKYYDIATEKREEFHR 127

  Fly    66 AVKEFEANGGSSAANGGGAKKRAKPAKKVAKKSKKEESDEDDDDESE 112
            |:.|:.....|.|                      .:..|.|.|.||
plant   128 AMTEYTKRMESGA----------------------HDESETDSDYSE 152

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HmgD	NP_726109.1	HMG-box_SSRP1-like	7..71	CDD:438810	18/67 (27%)
AT2G34450	NP_001031480.1	HMG-box_AtHMGB1-like	64..125	CDD:438821	16/60 (27%)