Protein Alignment HmgD and HMGB4

DIOPT Version :9

• Sequence 1: NP_001163244.1
• Gene: HmgD / 37481
• FlyBaseID: FBgn0004362
• Length: 112
• Species: Drosophila melanogaster
• Sequence 2: NP_001031364.2
• Gene: HMGB4 / 816263
• AraportID: AT2G17560
• Length: 138
• Species: Arabidopsis thaliana
• Alignment Length: 111
• Identity: 35/111 - (31%)
• Similarity: 57/111 - (51%)
• Gaps: 10/111 - (9%)

  Fly     3 DKPKRPLSAYMLWLNSARESIKRENPGIK-VTEVAKRGGELWRAM--KDKSEWEAKAAKAKDDYD 64
            ::||||.||:.::|...|:.....||..| |..|.|..|..|:||  :||:.:.|||...|.:|.
plant    33 NQPKRPPSAFFVFLEDFRKEFNLANPNNKSVATVGKAAGARWKAMTDEDKAPYVAKAESRKTEYI 97

  Fly    65 RAVKEFEAN--GGSSAANGGGAKKRAKPAKKVAKKSKKEESDEDDD 108
            :.|:::...  .|::.......|.:::..:.|:     ||..||||
plant    98 KNVQQYNLKLASGTNREEDDSDKSKSEVDEAVS-----EEEAEDDD 138

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HmgD	NP_001163244.1	HMGB-UBF_HMG-box	5..68	CDD:238686	25/65 (38%)
HMGB4	NP_001031364.2	HMG_box	35..103	CDD:278906	26/67 (39%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	57	1.000	Domainoid score	I3986
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	69	1.000	Inparanoid score	I2470
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	1	1.000	-	-		FOG0000133
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_100324
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	7	6.770