Protein Alignment HmgD and TFAM

DIOPT Version :9

• Sequence 1: NP_001163244.1
• Gene: HmgD / 37481
• FlyBaseID: FBgn0004362
• Length: 112
• Species: Drosophila melanogaster
• Sequence 2: NP_003192.1
• Gene: TFAM / 7019
• HGNCID: 11741
• Length: 246
• Species: Homo sapiens
• Alignment Length: 107
• Identity: 26/107 - (24%)
• Similarity: 43/107 - (40%)
• Gaps: 18/107 - (16%)

  Fly     5 PKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKD----------KSEWEAKAAKA 59
            ||:|:|:|:.:........|.:||..|.||:.:|..:.||.:.|          ::||:.
Human    50 PKKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQV----- 109

  Fly    60 KDDYDRAVKEFEANGGSSAANGGGAKKRAKPAKKVAKKSKKE 101
               |...:..|:.....|.......:...|..|:.|...|||
Human   110 ---YKEEISRFKEQLTPSQIMSLEKEIMDKHLKRKAMTKKKE 148

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HmgD	NP_001163244.1	HMGB-UBF_HMG-box	5..68	CDD:238686	18/72 (25%)
TFAM	NP_003192.1	HMG_box	50..117	CDD:395407	18/74 (24%)
		HMGB-UBF_HMG-box	155..216	CDD:238686

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR48112
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
User_Submission	0	0.000	Not matched by this tool.
	3	3.010