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Protein Alignment HmgD and hmgb2a
DIOPT Version :9
Sequence 1: | NP_001163244.1 |
Gene: | HmgD / 37481 |
FlyBaseID: | FBgn0004362 |
Length: | 112 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001032501.1 |
Gene: | hmgb2a / 641484 |
ZFINID: | ZDB-GENE-051120-126 |
Length: | 213 |
Species: | Danio rerio |
Alignment Length: | 112 |
Identity: | 43/112 - (38%) |
Similarity: | 67/112 - (59%) |
Gaps: | 8/112 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 PKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAM--KDKSEWEAKAAKAKDDYDRAV 67
||||.||:.::.:..|..:|.:||||.:.::||:.||:|..: |:||.:|.||.|.|:.|::.|
Zfish 95 PKRPPSAFFVFCSDHRPKVKGDNPGISIGDIAKKLGEMWSKLSPKEKSPYEQKAMKLKEKYEKDV 159
Fly 68 KEFEANGGSSAANGGGAKK--RAKPAKKVAKKSKKEESDEDDDDESE 112
..:.|.| ....|||| ..:||.|.|:....::.|||::||.|
Zfish 160 AAYRAKG----VKPDGAKKGGPGRPAGKKAEADDDDDEDEDEEDEEE 202
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5648 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1641977at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000133 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_100324 |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR48112 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
6 | 5.820 |
|
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