Protein Alignment HmgD and tfam

DIOPT Version :9

• Sequence 1: NP_001163244.1
• Gene: HmgD / 37481
• FlyBaseID: FBgn0004362
• Length: 112
• Species: Drosophila melanogaster
• Sequence 2: NP_001070857.1
• Gene: tfam / 571106
• ZFINID: ZDB-GENE-061013-552
• Length: 277
• Species: Danio rerio
• Alignment Length: 99
• Identity: 29/99 - (29%)
• Similarity: 59/99 - (59%)
• Gaps: 2/99 - (2%)

  Fly     5 PKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAM--KDKSEWEAKAAKAKDDYDRAV 67
            |||||:|||.::...:.::.::||.||..:|.::..:.|:.:  :.|..::..:.:||:.|..|:
Zfish    47 PKRPLTAYMTFVKDMQPTVSKQNPSIKSVDVMRKIAQQWKMLTTEQKQPFQVASLEAKEQYKLAL 111

  Fly    68 KEFEANGGSSAANGGGAKKRAKPAKKVAKKSKKE 101
            ::|:|....:.:.....:||.:.||:.|.:.|||
Zfish   112 EKFKAQLTPAESAAFAEEKRQRVAKRKAIRKKKE 145

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HmgD	NP_001163244.1	HMGB-UBF_HMG-box	5..68	CDD:238686	19/64 (30%)
tfam	NP_001070857.1	HMG_box	47..114	CDD:278906	19/66 (29%)
		HMGB-UBF_HMG-box	152..213	CDD:238686

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR48112
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	5	4.920