DRSC/TRiP Functional Genomics Resources

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Protein Alignment HmgD and Sox102F

DIOPT Version :10

Sequence 1:NP_726109.1 Gene:HmgD / 37481 FlyBaseID:FBgn0004362 Length:112 Species:Drosophila melanogaster
Sequence 2:XP_061505327.1 Gene:Sox102F / 5666784 VectorBaseID:AGAMI1_005164 Length:990 Species:Anopheles gambiae


Alignment Length:58 Identity:18/58 - (31%)
Similarity:31/58 - (53%) Gaps:5/58 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKS-----EWEAKAAK 58
            |||::|:|:|....|..|.:..|.:..:.::|..|..|:||.:..     |.:||.:|
Mosquito   861 KRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMTNLEKQPYYEEQAKLSK 918

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmgDNP_726109.1 HMG-box_SSRP1-like 7..71 CDD:438810 17/57 (30%)
Sox102FXP_061505327.1 None

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