DRSC/TRiP Functional Genomics Resources

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Protein Alignment HmgD and tox4a

DIOPT Version :10

Sequence 1:NP_726109.1 Gene:HmgD / 37481 FlyBaseID:FBgn0004362 Length:112 Species:Drosophila melanogaster
Sequence 2:NP_001428573.1 Gene:tox4a / 559853 ZFINID:ZDB-GENE-070912-576 Length:685 Species:Danio rerio


Alignment Length:80 Identity:23/80 - (28%)
Similarity:46/80 - (57%) Gaps:2/80 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAM--KDKSEWEAKAAKAKDDYDR 65
            ::|::|:|||.|:....:.:||.:||.....||:|....:|.::  :.|..::.|...||.||.:
Zfish   298 NEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKDYLK 362

  Fly    66 AVKEFEANGGSSAAN 80
            |:..:.|:..|.:::
Zfish   363 ALAAYRASQLSKSSS 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmgDNP_726109.1 HMG-box_SSRP1-like 7..71 CDD:438810 20/65 (31%)
tox4aNP_001428573.1 None

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