Protein Alignment HmgD and hmgxb4a

DIOPT Version :9

• Sequence 1: NP_001163244.1
• Gene: HmgD / 37481
• FlyBaseID: FBgn0004362
• Length: 112
• Species: Drosophila melanogaster
• Sequence 2: XP_005163967.1
• Gene: hmgxb4a / 559742
• ZFINID: ZDB-GENE-070912-675
• Length: 632
• Species: Danio rerio
• Alignment Length: 94
• Identity: 26/94 - (27%)
• Similarity: 46/94 - (48%)
• Gaps: 14/94 - (14%)

  Fly     3 DKPKRP-LSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAM--KDKSEWEAKAAKAKDDYD 64
            ||||:. ::||.::....|.:|..|.||:...|::|:..|:|:.:  |||..|..||...:...:
Zfish   434 DKPKKKNMTAYQVFCKEYRVNINAEQPGLVFGELSKKLAEVWKQLPEKDKLVWRQKAQYLQHKQN 498

  Fly    65 RA-----------VKEFEANGGSSAANGG 82
            :|           ..:.::.|.|.|.:.|
Zfish   499 KAEAMTVKRKTLTTSDSKSKGSSKAFSLG 527

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HmgD	NP_001163244.1	HMGB-UBF_HMG-box	5..68	CDD:238686	20/76 (26%)
hmgxb4a	XP_005163967.1	DUF4171	121..262	CDD:290491
		HMG-box	441..500	CDD:238037	17/58 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	1.010