DRSC/TRiP Functional Genomics Resources

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Protein Alignment HmgD and LOC4577567

DIOPT Version :10

Sequence 1:NP_726109.1 Gene:HmgD / 37481 FlyBaseID:FBgn0004362 Length:112 Species:Drosophila melanogaster
Sequence 2:XP_001237213.2 Gene:LOC4577567 / 4577567 VectorBaseID:AGAMI1_008566 Length:100 Species:Anopheles gambiae


Alignment Length:41 Identity:13/41 - (31%)
Similarity:19/41 - (46%) Gaps:5/41 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGEL 42
            |.||.:..||.:     :.||..||...:...|..:||.:|
Mosquito     3 SGKPVKSHSAIV-----SSESKPRERAPLDTNEAYRRGVKL 38

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmgDNP_726109.1 HMG-box_SSRP1-like 7..71 CDD:438810 10/36 (28%)
LOC4577567XP_001237213.2 None

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