Protein Alignment HmgD and Sox100B

DIOPT Version :10

• Sequence 1: NP_726109.1
• Gene: HmgD / 37481
• FlyBaseID: FBgn0004362
• Length: 112
• Species: Drosophila melanogaster
• Sequence 2: NP_651839.1
• Gene: Sox100B / 45039
• FlyBaseID: FBgn0024288
• Length: 529
• Species: Drosophila melanogaster
• Alignment Length: 108
• Identity: 30/108 - (27%)
• Similarity: 51/108 - (47%)
• Gaps: 25/108 - (23%)

  Fly     6 KRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMK--DKSEWEAKAAKAK-------D 61
            |||::|:|:|..:||..:.::.|.::.:|::|..|:||:.:|  ||..:...|.|.:       .
  Fly    78 KRPMNAFMVWAQAARRVMSKQYPHLQNSELSKSLGKLWKNLKDSDKKPFMEFAEKLRMTHKQEHP 142

  Fly    62 DYDRAVKEFEA---------NGGS-------SAANGGGAKKRA 88
            ||....:..:|         .|||       ||..|...|.|:
  Fly   143 DYKYQPRRKKARVLPSQQSGEGGSPGPEMTLSATMGSSGKPRS 185

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HmgD	NP_726109.1	HMG-box_SSRP1-like	7..71	CDD:438810	20/72 (28%)
Sox100B	NP_651839.1	HMG-box_SoxE	76..150	CDD:438840	21/71 (30%)